Strain Fitness in Shewanella oneidensis MR-1 around SO1891

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,987,267	-				-1.7
1,987,350	-				+0.1
1,987,821	-				-0.1
1,988,059	+		SO1891	0.20	+0.3
1,988,067	-		SO1891	0.21	+2.1
1,988,127	+		SO1891	0.30	+1.1
1,988,135	-		SO1891	0.31	+0.9
1,988,140	-		SO1891	0.32	+1.9
1,988,221	-		SO1891	0.44	-0.0
1,988,221	-		SO1891	0.44	+0.7
1,988,221	-		SO1891	0.44	+1.0
1,989,017	+	atoD	SO1892	0.46	-0.1
1,989,017	+	atoD	SO1892	0.46	+0.4
1,989,025	-	atoD	SO1892	0.47	+1.3
1,989,125	-	atoD	SO1892	0.61	+2.1
1,989,133	+	atoD	SO1892	0.62	+0.8
1,989,206	-	atoD	SO1892	0.73	+1.5