Strain Fitness in Shewanella oneidensis MR-1 around SO1801

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,891,185	-				+1.1
1,891,264	-	sapF	SO1801	0.11	+2.4
1,891,428	+	sapF	SO1801	0.32	+3.8
1,891,617	-	sapF	SO1801	0.56	-0.6
1,891,652	+	sapF	SO1801	0.60	+1.7
1,891,652	+	sapF	SO1801	0.60	+3.0
1,891,660	-	sapF	SO1801	0.61	+4.0
1,891,660	-	sapF	SO1801	0.61	-1.0
1,891,712	+	sapF	SO1801	0.68	+3.0
1,891,728	+	sapF	SO1801	0.70	+3.7
1,891,780	-	sapF	SO1801	0.76	+3.0
1,891,872	+	sapF	SO1801	0.88	+0.9
1,891,950	-				+0.2
1,891,993	-				+0.1
1,892,479	-	sapD	SO1802	0.53	+3.0