Strain Fitness in Shewanella oneidensis MR-1 around SO1646

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,731,324	-				-0.0
1,731,331	-				-0.3
1,731,529	+		SO1646	0.25	-0.6
1,731,696	+		SO1646	0.43	+0.8
1,731,730	-		SO1646	0.47	-0.3
1,731,769	+		SO1646	0.52	+1.6
1,731,777	-		SO1646	0.52	-0.6
1,731,870	+		SO1646	0.63	+1.6
1,731,927	+		SO1646	0.69	-1.6
1,731,959	-		SO1646	0.73	+0.5
1,731,965	-		SO1646	0.74	-0.8
1,732,008	+		SO1646	0.78	-0.4
1,732,009	-		SO1646	0.78	+0.4
1,732,023	-		SO1646	0.80	+1.7
1,732,074	+		SO1646	0.86	+1.3
1,732,169	+				+0.2
1,732,251	+				-0.9
1,732,319	-				+0.1
1,732,445	-				-0.8
1,732,476	+				+0.1
1,732,481	+				+1.1
1,732,505	+				+1.2
1,732,671	-		SO1647	0.15	+2.1
1,732,681	+		SO1647	0.16	-0.2
1,732,689	-		SO1647	0.16	+0.0
1,732,815	-		SO1647	0.23	+1.4
1,732,825	-		SO1647	0.23	+0.8
1,732,957	+		SO1647	0.30	+1.5
1,732,964	-		SO1647	0.30	-2.0
1,732,976	+		SO1647	0.31	+1.1
1,733,123	-		SO1647	0.39	-0.3