Strain Fitness in Shewanella oneidensis MR-1 around SO1295

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,344,294	-		SO1294	0.34	-0.9
1,344,366	+		SO1294	0.43	+0.4
1,344,435	+		SO1294	0.51	-0.4
1,344,493	+		SO1294	0.58	-2.3
1,344,499	-		SO1294	0.59	+0.1
1,344,533	+		SO1294	0.63	+0.7
1,344,569	-		SO1294	0.67	+1.2
1,344,572	-		SO1294	0.68	-0.5
1,344,714	-		SO1294	0.85	+1.1
1,344,763	+				+1.1
1,344,860	+				-0.1
1,344,869	-				+0.2
1,344,982	+				-1.3
1,345,027	+				-0.8
1,345,027	+				-0.7
1,345,319	-		SO1295	0.36	-2.7
1,345,336	-		SO1295	0.42	-2.2
1,345,342	-		SO1295	0.45	-1.6
1,345,366	-		SO1295	0.54	-3.3
1,345,366	-		SO1295	0.54	-1.4
1,345,447	-		SO1295	0.84	-1.1
1,345,550	+				-1.6
1,345,608	-				-3.7
1,345,612	-				-3.2