Strain Fitness in Shewanella oneidensis MR-1 around SO1196

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,238,199	-	secF-1	SO1194	0.39	-1.3
1,238,227	+	secF-1	SO1194	0.42	+2.0
1,238,237	-	secF-1	SO1194	0.44	-0.8
1,238,245	-	secF-1	SO1194	0.45	+0.4
1,238,402	-	secF-1	SO1194	0.62	-0.9
1,238,550	+	secF-1	SO1194	0.79	-0.3
1,238,603	-	secF-1	SO1194	0.85	-0.9
1,238,611	-	secF-1	SO1194	0.86	+1.2
1,238,976	+		SO1195	0.61	-0.5
1,239,139	-				-2.3
1,239,139	-				-0.5
1,239,141	+				-0.7
1,239,343	-	rrmJ	SO1196	0.26	-2.6
1,239,660	+	rrmJ	SO1196	0.76	+0.2
1,239,771	+				-2.2