Strain Fitness in Shewanella oneidensis MR-1 around SO1175

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,218,602	-				+1.2
1,218,664	+		SO1175	0.20	+0.1
1,218,752	+		SO1175	0.40	-0.4
1,218,752	+		SO1175	0.40	-2.0
1,218,772	-		SO1175	0.44	+0.6
1,218,772	-		SO1175	0.44	+0.6
1,218,772	-		SO1175	0.44	+1.8
1,218,797	+		SO1175	0.50	-2.6
1,218,875	-		SO1175	0.67	+0.8
1,218,905	+		SO1175	0.74	-1.1
1,218,905	+		SO1175	0.74	+0.9
1,218,905	+		SO1175	0.74	+2.8
1,218,913	-		SO1175	0.76	-0.1
1,218,913	-		SO1175	0.76	-0.6
1,218,999	-				+1.2
1,219,029	-				+0.2
1,219,084	+				+0.5
1,219,099	+				-0.5
1,219,123	-				-0.3
1,219,155	+		SO1176	0.16	-2.3
1,219,308	+		SO1176	0.47	+0.6
1,219,396	+		SO1176	0.65	+2.1
1,219,403	-		SO1176	0.66	-0.3
1,219,431	-		SO1176	0.72	-0.3
1,219,431	-		SO1176	0.72	-0.3
1,219,431	-		SO1176	0.72	-0.9
1,219,465	-		SO1176	0.79	+0.1
1,219,547	-				+0.8