Strain Fitness in Shewanella oneidensis MR-1 around SO1128

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,171,971	+				+0.8
1,171,973	+				+0.8
1,171,973	+				+0.2
1,171,973	+				-0.1
1,171,979	-				+0.7
1,171,981	-				-0.6
1,171,981	-				+1.6
1,172,050	-		SO1128	0.32	-1.4
1,172,086	-		SO1128	0.63	-0.8
1,172,156	+				+0.1
1,172,339	-				+0.9
1,172,340	-				+0.1
1,172,398	+				+2.0
1,172,406	-				-0.2
1,172,463	-				+0.2
1,172,735	+				+0.7
1,172,742	+				+0.4
1,172,742	+				+2.2
1,172,742	+				+0.6
1,172,750	-				-0.7
1,172,750	-				-1.4
1,172,752	+				+1.8
1,172,752	+				+0.3
1,172,752	+				+1.9
1,172,752	+				+1.7
1,172,760	-				-1.5
1,172,760	-				+0.6
1,172,789	+				+1.0
1,172,799	+				+1.1
1,172,807	-				+0.3
1,172,859	-				-1.2
1,172,863	-				+0.2