Strain Fitness in Shewanella oneidensis MR-1 around SO2467.1

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,587,718	-				-0.1
2,587,734	+				-0.9
2,587,734	+				+0.3
2,587,744	+				+0.3
2,587,761	-				+0.4
2,587,823	-				+1.2
2,587,889	+				+0.8
2,587,969	-				-0.9
2,588,041	+				-1.3
2,588,041	+				-0.1
2,588,041	+				+1.4
2,588,041	+				+2.0
2,588,049	-				+0.4
2,588,049	-				+2.0
2,588,049	-				-0.0
2,588,049	-				-0.6
2,588,049	-				+1.1
2,588,064	-				+1.7
2,588,081	+				-0.5
2,588,088	+				+0.0
2,588,096	-				-0.9
2,588,096	-				-1.2
2,588,106	-				+1.6
2,588,193	-		SO2467	0.25	+0.3
2,588,321	-		SO2467	0.59	+0.7
2,588,337	+		SO2467	0.63	-0.8
2,588,357	+		SO2467	0.68	-1.0
2,588,386	+		SO2467	0.76	+2.8
2,588,394	-		SO2467	0.78	-1.2
2,588,460	+				+3.0
2,588,460	+				+1.8
2,588,526	+				+1.8
2,588,534	-				+0.8
2,588,534	-				-0.0
2,588,534	-				-0.6
2,588,536	-				-1.0
2,588,536	-				-2.2
2,588,655	+				-0.1
2,588,655	+				+0.8
2,588,663	-				-0.0
2,588,791	+		SO2467.1	0.83	-1.4
2,588,802	+				+0.6
2,588,802	+				-2.7
2,588,833	+				+0.6
2,588,841	-				-0.7
2,588,842	+				-0.6
2,588,850	-				+2.3
2,588,888	+		SO_2468	0.15	-0.1
2,588,896	-		SO_2468	0.18	-0.4
2,589,039	+		SO_2468	0.55	+0.5
2,589,047	-		SO_2468	0.57	-1.5
2,589,057	-		SO_2468	0.60	+0.3
2,589,118	+		SO_2468	0.76	-2.0
2,589,125	+		SO_2468	0.78	-0.5
2,589,233	+				-0.6
2,589,233	+				+2.0
2,589,256	-				+1.4
2,589,447	-				-2.6
2,589,563	+				+0.2
2,589,570	-				+0.0
2,589,800	+				+3.0