Strain Fitness in Shewanella oneidensis MR-1 around SO3896

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
4,041,065	+				-1.1
4,041,215	-				+3.5
4,041,258	-				-0.4
4,041,508	+				-0.7
4,041,555	+				+0.4
4,041,743	+				-0.8
4,041,751	-				+1.8
4,042,145	+				+0.1
4,042,162	+				-0.8
4,042,162	+				+0.4
4,042,165	-				-1.3
4,042,165	-				-0.4
4,042,237	-		SO3896	0.16	+0.3
4,042,361	+		SO3896	0.28	+1.4
4,042,369	+		SO3896	0.28	+1.4
4,042,377	-		SO3896	0.29	-0.9
4,042,412	+		SO3896	0.32	-0.6
4,042,426	-		SO3896	0.33	-0.9
4,042,493	+		SO3896	0.39	-1.6
4,042,631	+		SO3896	0.52	-0.1
4,042,632	+		SO3896	0.52	-1.0
4,042,647	+		SO3896	0.53	-2.0
4,042,652	+		SO3896	0.54	-0.7
4,042,677	-		SO3896	0.56	+0.4
4,042,697	-		SO3896	0.58	+1.4
4,042,735	+		SO3896	0.61	-1.6
4,042,748	-		SO3896	0.62	-0.9
4,042,764	+		SO3896	0.64	-2.0
4,042,812	+		SO3896	0.68	+0.4
4,042,822	+		SO3896	0.69	-1.6
4,042,836	-		SO3896	0.70	-0.7
4,042,863	+		SO3896	0.73	+0.1
4,042,863	+		SO3896	0.73	-2.6
4,042,871	-		SO3896	0.74	+0.1
4,042,871	-		SO3896	0.74	-0.4
4,042,871	-		SO3896	0.74	+0.4
4,042,877	+		SO3896	0.74	-0.1
4,042,878	-		SO3896	0.74	-1.5
4,042,885	-		SO3896	0.75	-2.0
4,042,921	-		SO3896	0.78	-0.4
4,042,989	-		SO3896	0.84	+1.4
4,043,004	+		SO3896	0.85	-0.7
4,043,116	+				-0.6
4,043,117	-				+1.9
4,043,117	-				-0.2
4,043,336	+				+0.4
4,043,360	+				-0.1
4,043,378	+				+0.1
4,043,388	-				-0.9