Strain Fitness in Shewanella oneidensis MR-1 around SO3762

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,910,515	-				-0.4
3,910,520	+				-0.8
3,910,602	-		SO3761	0.13	-0.6
3,910,625	+		SO3761	0.16	+0.0
3,910,655	+		SO3761	0.19	-1.3
3,910,754	+		SO3761	0.29	+1.9
3,910,772	-		SO3761	0.31	+0.4
3,910,848	+		SO3761	0.38	-0.9
3,910,856	-		SO3761	0.39	+1.5
3,910,957	+		SO3761	0.49	+1.4
3,911,172	-		SO3761	0.71	-0.9
3,911,279	+		SO3761	0.82	-0.8
3,911,328	+		SO3761	0.87	+0.6
3,911,391	+				-1.0
3,911,399	-				-0.9
3,911,579	+		SO3762	0.12	-1.4
3,911,612	-		SO3762	0.15	-0.2
3,911,641	+		SO3762	0.19	+1.5
3,911,760	+		SO3762	0.32	+0.7
3,911,768	-		SO3762	0.33	-1.6
3,911,909	+		SO3762	0.48	+1.0
3,911,909	+		SO3762	0.48	-0.3
3,911,917	-		SO3762	0.49	-0.6
3,911,917	-		SO3762	0.49	-0.4
3,911,922	-		SO3762	0.50	+0.7
3,911,951	-		SO3762	0.53	+1.8
3,911,964	-		SO3762	0.54	+1.0
3,911,980	+		SO3762	0.56	+1.5
3,912,042	+		SO3762	0.63	-1.1
3,912,219	+		SO3762	0.83	-0.6
3,912,227	+		SO3762	0.84	-0.4
3,912,235	-		SO3762	0.85	+1.0
3,912,333	+				-1.8
3,912,398	-				+0.3
3,912,460	-				+1.6
3,912,524	-				-0.6
3,912,659	+		SO3763	0.16	-0.8
3,912,736	+		SO3763	0.21	-0.3
3,912,769	-		SO3763	0.23	-0.8
3,912,769	-		SO3763	0.23	-0.1
3,912,871	+		SO3763	0.29	+0.7
3,912,871	+		SO3763	0.29	-1.4
3,912,879	-		SO3763	0.29	+0.6
3,912,935	+		SO3763	0.32	+0.9
3,912,943	-		SO3763	0.33	+1.1
3,912,973	+		SO3763	0.34	+0.8
3,912,973	+		SO3763	0.34	+0.7
3,912,973	+		SO3763	0.34	+1.1
3,912,981	-		SO3763	0.35	-1.1
3,912,981	-		SO3763	0.35	-0.7
3,912,981	-		SO3763	0.35	+1.9
3,913,021	+		SO3763	0.37	-0.9
3,913,117	+		SO3763	0.43	-0.2
3,913,163	-		SO3763	0.46	-2.0
3,913,205	+		SO3763	0.48	-0.5
3,913,236	-		SO3763	0.50	-0.7
3,913,236	-		SO3763	0.50	+0.9
3,913,236	-		SO3763	0.50	-0.1
3,913,249	+		SO3763	0.50	+1.3
3,913,249	+		SO3763	0.50	+1.1
3,913,254	+		SO3763	0.51	-1.2
3,913,262	-		SO3763	0.51	-0.7
3,913,365	+		SO3763	0.57	-0.1
3,913,373	-		SO3763	0.58	-2.1