Strain Fitness in Shewanella oneidensis MR-1 around SO3696

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,846,242	-	pyrC	SO3695	0.22	+1.5
3,846,259	+	pyrC	SO3695	0.24	-0.8
3,846,306	+	pyrC	SO3695	0.29	-1.6
3,846,306	+	pyrC	SO3695	0.29	-2.7
3,846,314	-	pyrC	SO3695	0.29	-0.5
3,846,314	-	pyrC	SO3695	0.29	-0.8
3,846,314	-	pyrC	SO3695	0.29	-1.1
3,846,686	-	pyrC	SO3695	0.66	-0.1
3,846,686	-	pyrC	SO3695	0.66	+0.9
3,846,872	-	pyrC	SO3695	0.84	-0.3
3,846,932	+	pyrC	SO3695	0.89	-1.8
3,847,102	+				+0.1
3,847,347	-		SO3696	0.12	+1.4
3,847,351	+		SO3696	0.12	+0.2
3,847,364	-		SO3696	0.13	+0.7
3,847,370	-		SO3696	0.14	-1.4
3,847,414	+		SO3696	0.18	-0.5
3,847,482	-		SO3696	0.24	+0.2
3,847,512	+		SO3696	0.27	-0.9
3,847,520	-		SO3696	0.28	+1.6
3,847,694	+		SO3696	0.45	+0.1
3,847,694	+		SO3696	0.45	+0.1
3,847,694	+		SO3696	0.45	+1.8
3,847,702	-		SO3696	0.45	+1.7
3,847,830	+		SO3696	0.58	+0.2
3,847,881	+		SO3696	0.63	+1.4
3,847,887	+		SO3696	0.63	+0.9
3,847,887	+		SO3696	0.63	-1.1
3,847,887	+		SO3696	0.63	-1.7
3,847,943	-		SO3696	0.68	+0.0
3,848,011	+		SO3696	0.75	-1.5
3,848,011	+		SO3696	0.75	+1.3
3,848,011	+		SO3696	0.75	+1.5
3,848,019	-		SO3696	0.76	-0.1
3,848,021	-		SO3696	0.76	+0.8
3,848,091	+		SO3696	0.83	-1.4
3,848,192	-				-0.6
3,848,434	+				-0.7
3,848,434	+				-1.7
3,848,442	-				-0.0
3,848,446	+				+1.3
3,848,457	+				-0.1
3,848,464	+		SO3697	0.11	+1.1
3,848,631	-		SO3697	0.60	-0.3
3,848,659	+		SO3697	0.68	+0.3
3,848,723	+		SO3697	0.87	+0.9
3,848,723	+		SO3697	0.87	-0.2
3,848,804	+				+0.8
3,848,806	+				-0.3
3,848,903	+				+1.1
3,849,024	+		SO3698	0.14	-1.3
3,849,074	-		SO3698	0.25	-0.7
3,849,147	-		SO3698	0.41	+0.2
3,849,204	+		SO3698	0.54	+0.1
3,849,204	+		SO3698	0.54	+0.5
3,849,244	+		SO3698	0.63	+1.2
3,849,247	-		SO3698	0.64	+1.5