Strain Fitness in Shewanella oneidensis MR-1 around SO3507

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,657,918	+		SO3506	0.21	+0.6
3,657,926	-		SO3506	0.21	-1.7
3,658,004	+		SO3506	0.29	-0.9
3,658,012	-		SO3506	0.30	+0.3
3,658,012	-		SO3506	0.30	-0.0
3,658,035	+		SO3506	0.32	-0.4
3,658,073	+		SO3506	0.36	-1.5
3,658,073	+		SO3506	0.36	-0.7
3,658,073	+		SO3506	0.36	-0.9
3,658,073	+		SO3506	0.36	-1.2
3,658,074	-		SO3506	0.36	-0.2
3,658,080	-		SO3506	0.37	+2.2
3,658,109	+		SO3506	0.40	-2.2
3,658,135	-		SO3506	0.42	+0.7
3,658,257	+		SO3506	0.54	+1.4
3,658,343	-		SO3506	0.63	+0.2
3,658,497	-		SO3506	0.78	-0.7
3,658,684	-				-1.4
3,658,799	-				+1.9
3,658,817	-				-0.5
3,658,822	-				-0.8
3,658,845	-				-0.2
3,658,894	-		SO3507	0.13	+1.2
3,658,932	-		SO3507	0.17	-1.8
3,658,937	-		SO3507	0.18	+2.2
3,659,139	-		SO3507	0.40	-0.2
3,659,187	+		SO3507	0.45	+1.8
3,659,208	-		SO3507	0.48	+0.2
3,659,216	-		SO3507	0.49	-1.4
3,659,216	-		SO3507	0.49	-2.0
3,659,216	-		SO3507	0.49	+0.2
3,659,216	-		SO3507	0.49	+2.0
3,659,249	+		SO3507	0.52	-0.1
3,659,257	-		SO3507	0.53	+0.4
3,659,438	+		SO3507	0.73	-2.2
3,659,571	-		SO3507	0.88	-0.9
3,659,618	-				-1.2
3,659,676	-				+0.1
3,659,707	+				+1.8
3,660,162	-				+1.0
3,660,246	-	hex	SO3509	0.13	-0.7
3,660,282	-	hex	SO3509	0.14	+0.5
3,660,291	-	hex	SO3509	0.14	-1.2
3,660,297	-	hex	SO3509	0.15	+0.7
3,660,374	-	hex	SO3509	0.17	-0.3
3,660,381	+	hex	SO3509	0.18	+2.3
3,660,521	-	hex	SO3509	0.23	-1.2
3,660,660	+	hex	SO3509	0.28	-1.1
3,660,668	-	hex	SO3509	0.28	-1.2