Strain Fitness in Shewanella oneidensis MR-1 around SO3464
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
3,609,396 | - | recN | SO3462 | 0.85 | +1.4 |
3,609,413 | + | recN | SO3462 | 0.86 | -0.5 |
3,609,413 | + | recN | SO3462 | 0.86 | -1.1 |
3,609,413 | + | recN | SO3462 | 0.86 | +0.6 |
3,609,421 | - | recN | SO3462 | 0.87 | -0.9 |
3,609,421 | - | recN | SO3462 | 0.87 | -2.6 |
3,609,998 | - | pgpA | SO3463 | 0.45 | -0.1 |
3,610,027 | - | pgpA | SO3463 | 0.51 | -0.1 |
Or see this region's nucleotide sequence