Strain Fitness in Shewanella oneidensis MR-1 around SO3271

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,409,103	-		SO3270	0.32	-0.8
3,409,138	-		SO3270	0.35	+0.1
3,409,138	-		SO3270	0.35	-0.3
3,409,183	-		SO3270	0.39	+1.8
3,409,371	-		SO3270	0.56	-2.1
3,409,499	+		SO3270	0.67	-1.1
3,409,499	+		SO3270	0.67	-0.6
3,409,507	-		SO3270	0.68	-2.2
3,409,785	+				-0.2
3,409,785	+				+0.0
3,409,785	+				-0.2
3,409,786	+				-1.4
3,409,792	-				-1.5
3,409,819	-				-1.8
3,409,877	+				+0.5
3,409,890	-				+1.5
3,410,088	-		SO3271	0.21	-2.1
3,410,091	-		SO3271	0.22	-2.1
3,410,229	-		SO3271	0.36	-1.0
3,410,253	+		SO3271	0.38	-2.5
3,410,474	-		SO3271	0.60	-1.8
3,410,506	+		SO3271	0.63	-1.0
3,410,595	+		SO3271	0.72	-0.3
3,410,769	+		SO3271	0.90	-1.2
3,410,782	+				-0.4
3,410,926	-				+0.9
3,410,940	+				-1.7