Strain Fitness in Shewanella oneidensis MR-1 around SO3087

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,209,273	-				+0.6
3,209,278	-				-0.4
3,209,278	-				-0.7
3,209,278	-				+0.6
3,209,429	-				-0.0
3,209,434	+				+0.7
3,209,440	+				-0.5
3,209,524	+		SO3085	0.20	+0.3
3,209,524	+		SO3085	0.20	-0.8
3,209,532	-		SO3085	0.21	+0.0
3,209,542	-		SO3085	0.23	+1.6
3,209,565	-		SO3085	0.27	+0.0
3,209,947	+				+0.7
3,210,018	+				-2.3
3,210,085	+				-0.5
3,210,085	+				+0.4
3,210,085	+				-1.4
3,210,085	+				-1.4
3,210,086	+				-1.5
3,210,086	+				-0.9
3,210,086	+				-0.8
3,210,086	+				-0.8
3,210,086	+				-1.3
3,210,093	-				+0.6
3,210,093	-				-1.1
3,210,093	-				+0.2
3,210,094	-				+2.3
3,210,094	-				+1.8
3,210,094	-				+1.3
3,210,094	-				-0.4
3,210,094	-				-1.3
3,210,191	+				+1.0
3,210,210	-				+1.0
3,210,302	-		SO3087	0.19	-2.1
3,210,517	-				+0.7
3,210,517	-				+0.5
3,210,544	-				+0.2
3,210,722	+				-0.3
3,210,722	+				-0.5
3,210,722	+				-0.4
3,210,722	+				-0.9
3,210,730	-				-0.2
3,210,730	-				+0.5
3,210,730	-				+0.7
3,210,730	-				-3.0
3,210,906	+		SO3088	0.10	+1.4
3,210,906	+		SO3088	0.10	+1.6
3,210,914	-		SO3088	0.10	-0.5
3,210,914	-		SO3088	0.10	+0.3
3,210,944	+		SO3088	0.12	-0.5
3,210,980	+		SO3088	0.14	-0.4
3,211,113	-		SO3088	0.20	-1.7
3,211,121	+		SO3088	0.20	+0.2
3,211,176	+		SO3088	0.23	-0.7
3,211,251	+		SO3088	0.26	+0.4
3,211,251	+		SO3088	0.26	-1.1
3,211,259	-		SO3088	0.27	+0.8
3,211,365	+		SO3088	0.32	+0.1
3,211,371	+		SO3088	0.32	-0.7
3,211,389	+				-1.2
3,211,409	+		SO3088	0.34	-1.4
3,211,409	+		SO3088	0.34	-1.0
3,211,417	-		SO3088	0.34	+0.6
3,211,417	-		SO3088	0.34	-0.4
3,211,462	-		SO3088	0.36	+0.4