Strain Fitness in Shewanella oneidensis MR-1 around SO3044

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,156,237	+				+1.0
3,156,241	+				+0.0
3,156,249	-				+2.3
3,156,311	-				-1.4
3,156,359	-				+1.5
3,156,364	-				+0.6
3,156,387	+				-0.1
3,156,395	-				-0.6
3,156,471	+				-1.3
3,156,477	+				+0.6
3,156,477	+				-0.1
3,156,507	+				-0.7
3,156,514	+				+0.3
3,156,514	+				-2.0
3,156,514	+				+0.9
3,156,522	-				+0.7
3,156,532	-				-0.6
3,156,532	-				+1.3
3,156,532	-				+1.3
3,156,538	+				+0.3
3,156,546	-				-1.1
3,156,546	-				+0.2
3,156,556	+				-0.7
3,156,561	+				-0.4
3,156,569	-		SO3045	0.11	+0.8
3,156,597	+		SO3045	0.18	-1.0
3,156,650	-		SO3045	0.30	-1.3
3,156,672	+		SO3045	0.35	-0.9
3,156,672	+		SO3045	0.35	-0.8
3,156,672	+		SO3045	0.35	+2.7
3,156,672	+		SO3045	0.35	-1.1
3,156,674	+		SO3045	0.35	+1.1
3,156,674	+		SO3045	0.35	-2.3
3,156,680	-		SO3045	0.37	-0.3
3,156,680	-		SO3045	0.37	-1.4
3,156,680	-		SO3045	0.37	+1.3
3,156,680	-		SO3045	0.37	+0.1
3,156,680	-		SO3045	0.37	-1.4
3,156,680	-		SO3045	0.37	-1.5
3,156,680	-		SO3045	0.37	-0.6
3,156,680	-		SO3045	0.37	+1.0
3,156,680	-		SO3045	0.37	+2.2
3,156,680	-		SO3045	0.37	+0.1
3,156,680	-		SO3045	0.37	+0.0
3,156,682	-		SO3045	0.37	+0.8
3,156,727	+		SO3045	0.48	-0.2
3,156,727	+		SO3045	0.48	+0.4
3,156,735	-		SO3045	0.50	+0.3
3,156,738	-		SO3045	0.50	-0.5
3,156,741	+		SO3045	0.51	-0.7
3,156,743	+		SO3045	0.51	-1.0
3,156,743	-		SO3045	0.51	+1.1
3,156,751	-		SO3045	0.53	-0.7
3,156,771	+		SO3045	0.58	-0.7
3,156,771	-		SO3045	0.58	-1.4
3,156,819	+		SO3045	0.69	-0.2
3,156,827	-		SO3045	0.71	+0.3
3,156,830	+		SO3045	0.72	+0.2
3,156,831	-		SO3045	0.72	-1.0
3,156,835	+		SO3045	0.73	+0.6
3,156,838	-		SO3045	0.73	+1.7
3,156,910	-				-0.0
3,156,973	+				+0.6
3,156,998	+				-0.9
3,157,003	+				-0.5
3,157,018	-				+0.8
3,157,043	+				-1.8
3,157,045	+				-1.0
3,157,046	-				-0.5
3,157,053	-				+0.4
3,157,053	-				-0.4
3,157,058	+				-1.7
3,157,171	+				-1.2
3,157,171	+				+0.3
3,157,171	+				-0.5
3,157,171	+				+1.1
3,157,171	+				+1.3
3,157,171	+				-0.2
3,157,179	-				-1.4
3,157,179	-				-1.8
3,157,179	-				-0.2
3,157,179	-				-0.6
3,157,206	+				-0.1