Strain Fitness in Shewanella oneidensis MR-1 around SO2761

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,882,854	+				-1.6
2,882,862	-				-1.6
2,882,883	+	purM	SO2760	0.12	-1.0
2,882,976	+	purM	SO2760	0.20	-1.3
2,883,151	-	purM	SO2760	0.37	-0.7
2,883,244	-	purM	SO2760	0.46	-0.9
2,883,244	-	purM	SO2760	0.46	-2.2
2,883,507	-	purM	SO2760	0.71	-2.1
2,883,666	+	purM	SO2760	0.86	+0.8
2,883,731	-				-1.1
2,883,962	-	purN	SO2761	0.22	-0.4
2,884,223	+	purN	SO2761	0.63	-2.2
2,884,357	-	purN	SO2761	0.84	-2.0
2,884,493	-				-0.2
2,884,583	+				+1.0
2,884,630	+				+2.2
2,884,630	+				+0.1
2,884,630	+				-0.5
2,884,630	+				-0.6
2,884,645	+				+1.6
2,884,746	+		SO2762	0.19	-0.6
2,884,810	-		SO2762	0.28	+1.2
2,884,890	-		SO2762	0.39	+1.6
2,884,957	+		SO2762	0.48	+0.5
2,885,340	-				-0.3
2,885,342	+				+0.2
2,885,343	+				-2.0
2,885,361	+				-1.3
2,885,424	-				+0.3
2,885,424	-				+0.5
2,885,430	+				+2.3