Strain Fitness in Shewanella oneidensis MR-1 around SO2614
Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
2,750,398 | - | +0.2 | |||
2,750,406 | - | -0.8 | |||
2,750,552 | - | SO2614 | 0.20 | -0.0 | |
2,750,552 | - | SO2614 | 0.20 | +0.2 | |
2,750,572 | - | SO2614 | 0.22 | -2.2 | |
2,750,598 | - | SO2614 | 0.24 | -1.1 | |
2,750,704 | - | SO2614 | 0.35 | -0.4 | |
2,751,419 | - | -0.4 | |||
2,751,419 | - | -0.2 | |||
2,751,555 | - | pabC | SO2615 | 0.24 | +0.7 |
2,751,734 | - | pabC | SO2615 | 0.46 | +1.2 |
2,751,758 | - | pabC | SO2615 | 0.49 | -0.2 |
2,751,948 | - | pabC | SO2615 | 0.72 | -0.6 |
Or see this region's nucleotide sequence