Strain Fitness in Shewanella oneidensis MR-1 around SO2519

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,644,079	+		SO2518	0.12	-1.7
2,644,262	-		SO2518	0.35	+1.0
2,644,273	+		SO2518	0.37	-2.7
2,644,273	+		SO2518	0.37	+0.3
2,644,281	-		SO2518	0.38	+0.2
2,644,330	+		SO2518	0.44	+0.7
2,644,497	-		SO2518	0.65	-1.2
2,644,536	+		SO2518	0.70	+0.6
2,644,544	-		SO2518	0.71	-0.2
2,644,551	-		SO2518	0.72	+0.8
2,644,554	+		SO2518	0.73	-0.1
2,644,561	+		SO2518	0.74	+0.5
2,644,561	+		SO2518	0.74	-0.1
2,644,649	+		SO2518	0.85	+1.5
2,644,705	+				+0.3
2,644,723	+				+0.7
2,644,759	+				-0.9
2,645,108	+				+1.0
2,645,302	+		SO2519	0.25	+0.2
2,645,410	+		SO2519	0.34	+1.2
2,645,432	-		SO2519	0.36	+1.9
2,645,569	+		SO2519	0.48	-1.1
2,645,589	+		SO2519	0.50	+0.2
2,645,753	-		SO2519	0.64	-0.5
2,645,800	+		SO2519	0.68	-2.5
2,645,861	+		SO2519	0.74	-0.2
2,646,186	+				-1.1
2,646,275	+		SO2520	0.11	+0.9
2,646,379	+		SO2520	0.22	-0.8
2,646,510	-		SO2520	0.35	+1.2
2,646,544	+		SO2520	0.39	-1.5
2,646,671	+		SO2520	0.52	+1.5
2,646,781	+		SO2520	0.63	+0.4
2,646,788	+		SO2520	0.64	-1.3
2,646,826	-		SO2520	0.68	+0.3
2,646,985	+		SO2520	0.84	-0.6
2,647,078	+				-0.3
2,647,154	+				-0.0