Strain Fitness in Shewanella oneidensis MR-1 around SO2398

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,501,750	-		SO2397	0.25	-1.1
2,501,922	+		SO2397	0.46	-2.5
2,501,959	+		SO2397	0.51	-0.5
2,502,164	-		SO2397	0.75	+0.3
2,502,164	-		SO2397	0.75	+0.9
2,502,252	-		SO2397	0.86	-0.9
2,502,358	+				-0.2
2,502,364	-				-0.7
2,502,555	+	pyrF	SO2398	0.18	+0.8
2,502,710	-	pyrF	SO2398	0.40	-1.0
2,502,776	-	pyrF	SO2398	0.49	-0.5
2,502,804	-	pyrF	SO2398	0.53	-2.3
2,503,016	-	pyrF	SO2398	0.84	-2.2