Strain Fitness in Shewanella oneidensis MR-1 around SO2017

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,115,760	+	htpG	SO2016	0.70	+0.4
2,115,995	+	htpG	SO2016	0.82	+1.7
2,116,414	-				-0.7
2,116,748	+		SO2017	0.34	-2.0
2,116,748	+		SO2017	0.34	+2.1
2,116,826	+		SO2017	0.43	+0.1
2,116,834	-		SO2017	0.44	-0.7
2,116,891	-		SO2017	0.50	-2.0
2,116,972	-		SO2017	0.60	-1.2
2,117,143	+		SO2017	0.79	-0.6
2,117,143	+		SO2017	0.79	-1.7
2,117,151	-		SO2017	0.80	-0.8
2,117,168	+		SO2017	0.82	-1.2
2,117,177	+		SO2017	0.83	-1.0
2,117,299	+				+0.7
2,117,300	-				-0.7
2,117,307	-				-0.2
2,118,092	-				+0.7
2,118,153	+				+1.4
2,118,201	+				-1.4
2,118,289	-				-1.0