Strain Fitness in Shewanella oneidensis MR-1 around SO1652

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,739,654	-		SO1651	0.73	-3.0
1,739,656	-		SO1651	0.73	-0.7
1,739,656	-		SO1651	0.73	-0.3
1,739,698	-		SO1651	0.75	+0.5
1,739,724	+		SO1651	0.75	+0.5
1,739,952	+		SO1651	0.82	+1.0
1,740,001	+		SO1651	0.84	+0.5
1,740,034	+		SO1651	0.85	-2.4
1,740,159	+		SO1651	0.89	+1.8
1,740,229	+				+1.0
1,740,229	+				-0.4
1,740,350	+				+0.4
1,740,356	+				+1.7
1,740,374	+				+0.5
1,740,482	-				-1.4
1,740,482	-				-1.4
1,740,505	-				-0.6
1,740,517	-				+1.5
1,740,558	+				-0.0
1,740,686	+				-0.2
1,740,694	-				-0.3
1,740,773	-		SO1652	0.18	+1.5
1,740,914	+		SO1652	0.37	-1.6
1,740,967	+		SO1652	0.44	-1.2
1,740,972	+		SO1652	0.44	+1.6
1,740,989	+		SO1652	0.47	-4.4
1,740,989	+		SO1652	0.47	+0.2
1,740,989	+		SO1652	0.47	-0.1
1,741,120	+		SO1652	0.64	-1.1
1,741,190	-		SO1652	0.73	+1.0
1,741,295	+		SO1652	0.87	+0.7
1,741,316	-		SO1652	0.90	+0.2
1,742,391	+				+0.1
1,742,392	+				+3.2