Strain Fitness in Shewanella oneidensis MR-1 around SO1413

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,468,879	+		SO1412	0.20	-0.1
1,468,910	-		SO1412	0.23	-1.2
1,468,926	+		SO1412	0.25	-0.3
1,468,932	+		SO1412	0.25	-1.7
1,469,054	-		SO1412	0.36	-0.1
1,469,076	-		SO1412	0.38	+0.8
1,469,078	+		SO1412	0.38	-0.1
1,469,078	+		SO1412	0.38	-0.1
1,469,132	-		SO1412	0.43	-0.6
1,469,138	+		SO1412	0.43	+0.9
1,469,138	+		SO1412	0.43	+0.2
1,469,141	-		SO1412	0.44	+0.0
1,469,145	+		SO1412	0.44	-0.1
1,469,223	+		SO1412	0.51	-1.5
1,469,231	-		SO1412	0.51	-0.9
1,469,231	-		SO1412	0.51	+0.6
1,469,394	+		SO1412	0.66	+0.6
1,469,482	-		SO1412	0.74	-0.5
1,469,621	-		SO1412	0.86	-0.7
1,469,671	-				+0.3
1,469,710	-				+0.1
1,469,756	-				-1.4
1,469,927	-		SO1413	0.29	-0.2
1,469,956	+		SO1413	0.37	+0.5
1,469,965	-		SO1413	0.39	-0.3
1,469,980	-		SO1413	0.43	-1.9
1,470,033	+		SO1413	0.57	+1.1
1,470,101	-		SO1413	0.76	-0.6
1,470,101	-		SO1413	0.76	+0.4
1,470,101	-		SO1413	0.76	-0.3
1,470,101	-		SO1413	0.76	-1.4
1,470,105	+		SO1413	0.77	-0.4
1,470,174	-				-0.2
1,470,399	+		SO1414	0.13	+0.2
1,470,520	-		SO1414	0.21	+1.9
1,470,581	-		SO1414	0.25	+0.5
1,470,628	+		SO1414	0.28	-1.8
1,470,656	+		SO1414	0.30	+1.1
1,470,656	+		SO1414	0.30	-1.3
1,470,896	-		SO1414	0.46	+1.4
1,470,947	-		SO1414	0.49	-0.0
1,470,979	-		SO1414	0.52	+0.7
1,470,980	+		SO1414	0.52	+0.7
1,470,980	+		SO1414	0.52	+0.6
1,470,980	+		SO1414	0.52	+0.4
1,470,988	-		SO1414	0.52	-1.0
1,470,988	-		SO1414	0.52	+1.1
1,470,988	-		SO1414	0.52	-2.2
1,470,988	-		SO1414	0.52	-1.4
1,470,988	-		SO1414	0.52	+1.6
1,470,988	-		SO1414	0.52	-1.0
1,470,988	-		SO1414	0.52	+0.2
1,471,022	-		SO1414	0.54	+2.7
1,471,031	-		SO1414	0.55	-0.4
1,471,135	-		SO1414	0.62	-0.6
1,471,140	-		SO1414	0.62	+0.9
1,471,147	-		SO1414	0.63	+0.3
1,471,159	-		SO1414	0.63	+1.1
1,471,177	+		SO1414	0.65	-0.4
1,471,184	+		SO1414	0.65	-0.8
1,471,184	+		SO1414	0.65	-0.8
1,471,184	+		SO1414	0.65	-0.7
1,471,184	+		SO1414	0.65	-0.7
1,471,185	-		SO1414	0.65	+1.3
1,471,185	-		SO1414	0.65	+0.6