Strain Fitness in Shewanella oneidensis MR-1 around SO1267

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,313,435	-				-1.7
1,313,455	-				-0.1
1,313,473	+				-0.6
1,313,498	+		SO1265	0.12	-0.2
1,313,682	+		SO1265	0.46	-0.3
1,313,686	-		SO1265	0.47	+0.5
1,313,833	+		SO1265	0.73	+0.7
1,313,989	-				-1.0
1,313,991	+				-2.9
1,313,991	+				+0.5
1,313,991	+				-0.4
1,313,991	+				+0.7
1,313,991	+				+0.5
1,313,999	-				+1.0
1,314,001	+				-0.0
1,314,356	+				+2.1
1,314,365	+				+3.3
1,314,368	-				+2.5
1,314,478	-		SO1267	0.15	+2.5
1,314,596	+		SO1267	0.30	+1.3
1,314,871	+				+0.7
1,314,871	+		SO1267	0.67	+0.6
1,314,871	+		SO1267	0.67	-0.7
1,314,894	+		SO1267	0.70	-0.4
1,314,902	-		SO1267	0.71	+3.3
1,314,902	-		SO1267	0.71	+2.5
1,314,902	-		SO1267	0.71	+3.0
1,314,902	-		SO1267	0.71	+3.3
1,314,902	-		SO1267	0.71	+2.2
1,314,902	-		SO1267	0.71	+2.7
1,314,917	-		SO1267	0.73	+2.5
1,315,199	+				+3.6
1,315,199	+				+2.6
1,315,734	+		SO1268	0.45	+3.0
1,315,734	+		SO1268	0.45	+3.8
1,315,814	-		SO1268	0.51	+1.6