Strain Fitness in Shewanella oneidensis MR-1 around SO1170

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,212,618	-				+0.7
1,212,676	-		SO1169	0.11	-1.0
1,212,676	-		SO1169	0.11	+0.8
1,212,720	-		SO1169	0.21	-2.3
1,212,721	-		SO1169	0.21	+1.2
1,212,772	-		SO1169	0.32	-1.0
1,212,849	-		SO1169	0.48	-2.4
1,212,879	-		SO1169	0.54	-2.0
1,212,902	-		SO1169	0.59	-3.5
1,213,012	-		SO1169	0.83	-1.4
1,213,055	-				-1.4
1,213,149	-		SO1170	0.17	-3.1
1,213,434	-				-2.1
1,213,457	+				-0.0
1,213,466	+				-1.9
1,213,474	-				-2.4
1,214,186	-				+0.5