Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2947 and DVU2948 are separated by 669 nucleotides DVU2948 and DVU2949 are separated by 203 nucleotides DVU2949 and DVU2950 overlap by 14 nucleotides
DVU2947: DVU2947 - anaerobic ribonucleoside-triphosphate reductase, putative (TIGR), at 3,050,747 to 3,052,816
DVU2947
DVU2948: DVU2948 - bacterial flagellin N-terminal domain protein (TIGR), at 3,053,486 to 3,054,334
DVU2948
DVU2949: DVU2949 - membrane protein, putative (TIGR), at 3,054,538 to 3,054,891
DVU2949
DVU2950: DVU2950 - sensory box protein/GGDEF domain protein, authentic frameshift (TIGR), at 3,054,878 to 3,056,595
DVU2950
Position (kb)
3053
3054
3055 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3052.636 kb on - strand at 3052.645 kb on + strand at 3052.645 kb on + strand at 3052.655 kb on + strand at 3052.833 kb on + strand at 3052.877 kb on - strand at 3052.885 kb on - strand at 3052.972 kb on + strand at 3052.990 kb on - strand at 3052.990 kb on - strand at 3053.165 kb on + strand at 3053.419 kb on + strand at 3053.419 kb on + strand at 3053.419 kb on + strand at 3053.419 kb on + strand at 3053.434 kb on - strand at 3053.564 kb on - strand at 3053.564 kb on - strand at 3053.586 kb on + strand, within DVU2948 at 3053.606 kb on + strand, within DVU2948 at 3053.622 kb on + strand, within DVU2948 at 3053.735 kb on - strand, within DVU2948 at 3053.801 kb on - strand, within DVU2948 at 3053.851 kb on - strand, within DVU2948 at 3053.876 kb on + strand, within DVU2948 at 3053.909 kb on + strand, within DVU2948 at 3053.917 kb on - strand, within DVU2948 at 3053.936 kb on - strand, within DVU2948 at 3053.995 kb on + strand, within DVU2948 at 3054.023 kb on + strand, within DVU2948 at 3054.079 kb on + strand, within DVU2948 at 3054.079 kb on + strand, within DVU2948 at 3054.087 kb on - strand, within DVU2948 at 3054.087 kb on - strand, within DVU2948 at 3054.115 kb on + strand, within DVU2948 at 3054.154 kb on + strand, within DVU2948 at 3054.162 kb on - strand, within DVU2948 at 3054.267 kb on + strand at 3054.269 kb on + strand at 3054.269 kb on + strand at 3054.288 kb on + strand at 3054.288 kb on + strand at 3054.374 kb on + strand at 3054.379 kb on + strand at 3054.387 kb on - strand at 3054.394 kb on + strand at 3054.397 kb on - strand at 3054.402 kb on - strand at 3054.402 kb on - strand at 3054.402 kb on - strand at 3054.478 kb on - strand at 3054.530 kb on - strand at 3054.540 kb on + strand at 3054.557 kb on + strand at 3054.569 kb on + strand at 3054.597 kb on + strand, within DVU2949 at 3054.597 kb on + strand, within DVU2949 at 3054.597 kb on + strand, within DVU2949 at 3054.638 kb on - strand, within DVU2949 at 3054.638 kb on - strand, within DVU2949 at 3054.667 kb on + strand, within DVU2949 at 3054.703 kb on - strand, within DVU2949 at 3054.703 kb on - strand, within DVU2949 at 3054.706 kb on + strand, within DVU2949 at 3054.716 kb on + strand, within DVU2949 at 3054.720 kb on + strand, within DVU2949 at 3054.721 kb on + strand, within DVU2949 at 3054.740 kb on - strand, within DVU2949 at 3054.755 kb on + strand, within DVU2949 at 3054.766 kb on + strand, within DVU2949 at 3054.860 kb on - strand at 3054.900 kb on + strand at 3054.968 kb on + strand at 3054.976 kb on - strand at 3055.033 kb on + strand at 3055.033 kb on + strand at 3055.059 kb on + strand, within DVU2950 at 3055.067 kb on - strand, within DVU2950 at 3055.152 kb on + strand, within DVU2950 at 3055.162 kb on - strand, within DVU2950 at 3055.174 kb on + strand, within DVU2950 at 3055.253 kb on + strand, within DVU2950 at 3055.261 kb on - strand, within DVU2950 at 3055.278 kb on + strand, within DVU2950 at 3055.286 kb on - strand, within DVU2950 at 3055.323 kb on - strand, within DVU2950 at 3055.327 kb on + strand, within DVU2950
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 3,052,636 - +1.9 3,052,645 + -0.2 3,052,645 + -0.6 3,052,655 + -0.6 3,052,833 + +2.3 3,052,877 - +0.2 3,052,885 - -0.3 3,052,972 + -0.6 3,052,990 - -0.7 3,052,990 - +0.6 3,053,165 + +1.1 3,053,419 + -0.9 3,053,419 + -0.4 3,053,419 + -0.5 3,053,419 + +0.1 3,053,434 - -0.3 3,053,564 - +0.3 3,053,564 - -1.6 3,053,586 + DVU2948 0.12 -1.4 3,053,606 + DVU2948 0.14 -0.9 3,053,622 + DVU2948 0.16 +0.3 3,053,735 - DVU2948 0.29 +1.1 3,053,801 - DVU2948 0.37 +1.1 3,053,851 - DVU2948 0.43 -0.8 3,053,876 + DVU2948 0.46 -1.9 3,053,909 + DVU2948 0.50 -1.9 3,053,917 - DVU2948 0.51 +2.4 3,053,936 - DVU2948 0.53 +2.4 3,053,995 + DVU2948 0.60 -1.9 3,054,023 + DVU2948 0.63 -2.1 3,054,079 + DVU2948 0.70 +0.3 3,054,079 + DVU2948 0.70 +0.1 3,054,087 - DVU2948 0.71 -1.8 3,054,087 - DVU2948 0.71 -1.3 3,054,115 + DVU2948 0.74 -0.1 3,054,154 + DVU2948 0.79 -1.0 3,054,162 - DVU2948 0.80 -1.3 3,054,267 + -1.5 3,054,269 + +0.3 3,054,269 + +1.9 3,054,288 + +0.3 3,054,288 + -1.6 3,054,374 + +0.1 3,054,379 + -0.6 3,054,387 - -1.3 3,054,394 + -0.6 3,054,397 - +1.4 3,054,402 - +0.9 3,054,402 - -1.7 3,054,402 - -1.1 3,054,478 - +1.3 3,054,530 - -4.1 3,054,540 + +0.3 3,054,557 + -0.6 3,054,569 + +1.4 3,054,597 + DVU2949 0.17 +0.6 3,054,597 + DVU2949 0.17 -0.5 3,054,597 + DVU2949 0.17 -0.9 3,054,638 - DVU2949 0.28 +0.3 3,054,638 - DVU2949 0.28 -0.1 3,054,667 + DVU2949 0.36 +1.1 3,054,703 - DVU2949 0.47 -0.7 3,054,703 - DVU2949 0.47 +0.4 3,054,706 + DVU2949 0.47 -1.0 3,054,716 + DVU2949 0.50 +0.1 3,054,720 + DVU2949 0.51 -0.5 3,054,721 + DVU2949 0.52 -1.6 3,054,740 - DVU2949 0.57 +0.0 3,054,755 + DVU2949 0.61 -2.5 3,054,766 + DVU2949 0.64 -0.6 3,054,860 - -1.2 3,054,900 + +0.6 3,054,968 + +0.5 3,054,976 - -0.1 3,055,033 + -0.9 3,055,033 + -1.4 3,055,059 + DVU2950 0.11 +1.3 3,055,067 - DVU2950 0.11 -0.6 3,055,152 + DVU2950 0.16 -0.8 3,055,162 - DVU2950 0.17 +0.4 3,055,174 + DVU2950 0.17 -2.2 3,055,253 + DVU2950 0.22 -0.8 3,055,261 - DVU2950 0.22 -0.1 3,055,278 + DVU2950 0.23 -2.8 3,055,286 - DVU2950 0.24 +2.5 3,055,323 - DVU2950 0.26 +0.9 3,055,327 + DVU2950 0.26 -0.1
Or see this region's nucleotide sequence