Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2019 and DVU2020 are separated by 14 nucleotides DVU2020 and DVU2021 overlap by 4 nucleotides DVU2021 and DVU2022 overlap by 1 nucleotides
DVU2019: DVU2019 - conserved hypothetical protein (TIGR), at 2,096,176 to 2,098,245
DVU2019
DVU2020: DVU2020 - conserved hypothetical protein (TIGR), at 2,098,260 to 2,100,758
DVU2020
DVU2021: DVU2021 - hypothetical protein (TIGR), at 2,100,755 to 2,101,222
DVU2021
DVU2022: DVU2022 - conserved hypothetical protein (TIGR), at 2,101,222 to 2,104,698
DVU2022
Position (kb)
2098
2099
2100
2101 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2097.283 kb on + strand, within DVU2019 at 2097.286 kb on - strand, within DVU2019 at 2097.388 kb on + strand, within DVU2019 at 2097.429 kb on + strand, within DVU2019 at 2097.578 kb on - strand, within DVU2019 at 2097.844 kb on - strand, within DVU2019 at 2097.960 kb on + strand, within DVU2019 at 2097.960 kb on + strand, within DVU2019 at 2097.968 kb on - strand, within DVU2019 at 2097.968 kb on - strand, within DVU2019 at 2097.968 kb on - strand, within DVU2019 at 2098.026 kb on - strand, within DVU2019 at 2098.026 kb on - strand, within DVU2019 at 2098.043 kb on + strand at 2098.117 kb on + strand at 2098.120 kb on - strand at 2098.130 kb on - strand at 2098.341 kb on - strand at 2098.413 kb on + strand at 2098.451 kb on + strand at 2098.498 kb on + strand at 2098.498 kb on + strand at 2098.560 kb on - strand, within DVU2020 at 2098.577 kb on + strand, within DVU2020 at 2098.595 kb on + strand, within DVU2020 at 2098.657 kb on + strand, within DVU2020 at 2098.706 kb on - strand, within DVU2020 at 2098.756 kb on + strand, within DVU2020 at 2098.767 kb on + strand, within DVU2020 at 2098.798 kb on - strand, within DVU2020 at 2098.811 kb on + strand, within DVU2020 at 2098.940 kb on + strand, within DVU2020 at 2099.027 kb on + strand, within DVU2020 at 2099.223 kb on - strand, within DVU2020 at 2099.230 kb on - strand, within DVU2020 at 2099.300 kb on + strand, within DVU2020 at 2099.323 kb on - strand, within DVU2020 at 2099.361 kb on + strand, within DVU2020 at 2099.427 kb on + strand, within DVU2020 at 2099.465 kb on + strand, within DVU2020 at 2099.670 kb on - strand, within DVU2020 at 2099.722 kb on - strand, within DVU2020 at 2099.758 kb on - strand, within DVU2020 at 2099.782 kb on + strand, within DVU2020 at 2099.792 kb on - strand, within DVU2020 at 2099.918 kb on + strand, within DVU2020 at 2099.931 kb on - strand, within DVU2020 at 2100.010 kb on + strand, within DVU2020 at 2100.036 kb on + strand, within DVU2020 at 2100.068 kb on - strand, within DVU2020 at 2100.115 kb on + strand, within DVU2020 at 2100.414 kb on + strand, within DVU2020 at 2100.528 kb on - strand at 2100.558 kb on - strand at 2100.899 kb on - strand, within DVU2021 at 2101.154 kb on - strand, within DVU2021 at 2101.330 kb on - strand at 2101.342 kb on - strand at 2101.419 kb on - strand at 2101.484 kb on + strand at 2101.505 kb on + strand at 2101.547 kb on + strand at 2101.547 kb on + strand at 2101.555 kb on - strand at 2101.555 kb on - strand at 2101.572 kb on + strand, within DVU2022 at 2101.639 kb on - strand, within DVU2022 at 2101.662 kb on + strand, within DVU2022 at 2101.679 kb on + strand, within DVU2022 at 2101.687 kb on - strand, within DVU2022 at 2101.687 kb on - strand, within DVU2022
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 2,097,283 + DVU2019 0.53 -1.7 2,097,286 - DVU2019 0.54 -0.9 2,097,388 + DVU2019 0.59 -2.5 2,097,429 + DVU2019 0.61 -0.2 2,097,578 - DVU2019 0.68 -0.7 2,097,844 - DVU2019 0.81 -0.2 2,097,960 + DVU2019 0.86 +0.7 2,097,960 + DVU2019 0.86 +1.5 2,097,968 - DVU2019 0.87 -1.7 2,097,968 - DVU2019 0.87 -1.4 2,097,968 - DVU2019 0.87 -1.7 2,098,026 - DVU2019 0.89 -0.5 2,098,026 - DVU2019 0.89 +1.0 2,098,043 + +0.5 2,098,117 + -0.6 2,098,120 - -1.8 2,098,130 - -0.5 2,098,341 - +0.3 2,098,413 + +1.5 2,098,451 + -0.2 2,098,498 + -0.3 2,098,498 + +0.8 2,098,560 - DVU2020 0.12 +3.5 2,098,577 + DVU2020 0.13 +0.4 2,098,595 + DVU2020 0.13 -0.1 2,098,657 + DVU2020 0.16 -1.1 2,098,706 - DVU2020 0.18 +0.8 2,098,756 + DVU2020 0.20 +0.2 2,098,767 + DVU2020 0.20 +0.8 2,098,798 - DVU2020 0.22 +0.1 2,098,811 + DVU2020 0.22 +1.2 2,098,940 + DVU2020 0.27 -0.6 2,099,027 + DVU2020 0.31 +1.3 2,099,223 - DVU2020 0.39 +0.2 2,099,230 - DVU2020 0.39 +0.6 2,099,300 + DVU2020 0.42 +0.7 2,099,323 - DVU2020 0.43 +0.5 2,099,361 + DVU2020 0.44 +0.1 2,099,427 + DVU2020 0.47 -0.8 2,099,465 + DVU2020 0.48 +0.1 2,099,670 - DVU2020 0.56 +1.5 2,099,722 - DVU2020 0.59 +0.0 2,099,758 - DVU2020 0.60 +0.1 2,099,782 + DVU2020 0.61 -0.4 2,099,792 - DVU2020 0.61 +2.5 2,099,918 + DVU2020 0.66 -1.0 2,099,931 - DVU2020 0.67 +2.2 2,100,010 + DVU2020 0.70 +1.1 2,100,036 + DVU2020 0.71 +0.2 2,100,068 - DVU2020 0.72 -1.0 2,100,115 + DVU2020 0.74 +0.6 2,100,414 + DVU2020 0.86 +0.1 2,100,528 - +0.4 2,100,558 - +1.5 2,100,899 - DVU2021 0.31 -0.6 2,101,154 - DVU2021 0.85 +0.4 2,101,330 - -0.1 2,101,342 - +1.1 2,101,419 - +0.5 2,101,484 + +0.1 2,101,505 + +1.3 2,101,547 + -0.1 2,101,547 + +0.6 2,101,555 - -0.0 2,101,555 - +0.7 2,101,572 + DVU2022 0.10 +0.5 2,101,639 - DVU2022 0.12 +0.6 2,101,662 + DVU2022 0.13 +0.6 2,101,679 + DVU2022 0.13 +0.9 2,101,687 - DVU2022 0.13 -0.5 2,101,687 - DVU2022 0.13 +1.7
Or see this region's nucleotide sequence