Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1780 and DVU1781 are separated by 184 nucleotides DVU1781 and DVU1782 overlap by 8 nucleotides DVU1782 and DVU1783 overlap by 8 nucleotides DVU1783 and DVU1784 are separated by 171 nucleotides
DVU1780: DVU1780 - conserved hypothetical protein (TIGR), at 1,843,438 to 1,843,743
DVU1780
DVU1781: DVU1781 - conserved hypothetical protein (TIGR), at 1,843,928 to 1,844,593
DVU1781
DVU1782: DVU1782 - iron-sulfur cluster-binding protein (TIGR), at 1,844,586 to 1,846,013
DVU1782
DVU1783: DVU1783 - cysteine-rich domain protein (TIGR), at 1,846,006 to 1,846,758
DVU1783
DVU1784: DVU1784 - oxidoreductase, short-chain dehydrogenase/reductase family (TIGR), at 1,846,930 to 1,847,691
DVU1784
Position (kb)
1844
1845
1846
1847 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1843.605 kb on + strand, within DVU1780 at 1843.611 kb on + strand, within DVU1780 at 1843.693 kb on - strand, within DVU1780 at 1843.712 kb on - strand, within DVU1780 at 1843.714 kb on - strand at 1843.722 kb on - strand at 1843.722 kb on - strand at 1843.754 kb on + strand at 1843.799 kb on + strand at 1843.909 kb on + strand at 1843.971 kb on + strand at 1844.002 kb on + strand, within DVU1781 at 1844.011 kb on + strand, within DVU1781 at 1844.068 kb on + strand, within DVU1781 at 1844.079 kb on + strand, within DVU1781 at 1844.113 kb on - strand, within DVU1781 at 1844.168 kb on + strand, within DVU1781 at 1844.176 kb on - strand, within DVU1781 at 1844.201 kb on - strand, within DVU1781 at 1844.303 kb on - strand, within DVU1781 at 1844.319 kb on + strand, within DVU1781 at 1844.345 kb on + strand, within DVU1781 at 1844.388 kb on + strand, within DVU1781 at 1844.409 kb on + strand, within DVU1781 at 1844.444 kb on - strand, within DVU1781 at 1844.596 kb on - strand at 1844.596 kb on - strand at 1844.618 kb on + strand at 1844.664 kb on + strand at 1844.681 kb on + strand at 1844.681 kb on + strand at 1844.691 kb on + strand at 1844.759 kb on - strand, within DVU1782 at 1844.795 kb on - strand, within DVU1782 at 1844.841 kb on + strand, within DVU1782 at 1844.865 kb on + strand, within DVU1782 at 1844.891 kb on + strand, within DVU1782 at 1844.914 kb on + strand, within DVU1782 at 1845.044 kb on - strand, within DVU1782 at 1845.088 kb on + strand, within DVU1782 at 1845.098 kb on + strand, within DVU1782 at 1845.106 kb on - strand, within DVU1782 at 1845.300 kb on + strand, within DVU1782 at 1845.476 kb on - strand, within DVU1782 at 1845.558 kb on + strand, within DVU1782 at 1845.599 kb on + strand, within DVU1782 at 1845.692 kb on + strand, within DVU1782 at 1845.728 kb on - strand, within DVU1782 at 1845.736 kb on - strand, within DVU1782 at 1845.803 kb on + strand, within DVU1782 at 1845.822 kb on - strand, within DVU1782 at 1845.855 kb on - strand, within DVU1782 at 1845.860 kb on + strand, within DVU1782 at 1845.868 kb on - strand, within DVU1782 at 1845.929 kb on - strand at 1845.998 kb on - strand at 1846.033 kb on - strand at 1846.048 kb on + strand at 1846.048 kb on + strand at 1846.053 kb on + strand at 1846.243 kb on + strand, within DVU1783 at 1846.314 kb on + strand, within DVU1783 at 1846.355 kb on + strand, within DVU1783 at 1846.491 kb on - strand, within DVU1783 at 1846.528 kb on - strand, within DVU1783 at 1846.618 kb on - strand, within DVU1783 at 1846.633 kb on + strand, within DVU1783 at 1846.730 kb on + strand at 1846.738 kb on - strand at 1846.738 kb on - strand at 1846.768 kb on - strand at 1846.787 kb on + strand at 1846.886 kb on + strand at 1846.914 kb on + strand at 1846.929 kb on - strand at 1846.930 kb on + strand at 1846.938 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 1,843,605 + DVU1780 0.55 -1.3 1,843,611 + DVU1780 0.57 -0.2 1,843,693 - DVU1780 0.83 -0.2 1,843,712 - DVU1780 0.90 +0.3 1,843,714 - +0.9 1,843,722 - -3.0 1,843,722 - -0.8 1,843,754 + -1.9 1,843,799 + -1.2 1,843,909 + -0.5 1,843,971 + -0.2 1,844,002 + DVU1781 0.11 +0.2 1,844,011 + DVU1781 0.12 -2.5 1,844,068 + DVU1781 0.21 -0.7 1,844,079 + DVU1781 0.23 +3.8 1,844,113 - DVU1781 0.28 -0.5 1,844,168 + DVU1781 0.36 -0.5 1,844,176 - DVU1781 0.37 +0.2 1,844,201 - DVU1781 0.41 -0.1 1,844,303 - DVU1781 0.56 +2.1 1,844,319 + DVU1781 0.59 -1.7 1,844,345 + DVU1781 0.63 +1.0 1,844,388 + DVU1781 0.69 +0.4 1,844,409 + DVU1781 0.72 +0.1 1,844,444 - DVU1781 0.77 -0.4 1,844,596 - -0.5 1,844,596 - -0.6 1,844,618 + -0.7 1,844,664 + -0.3 1,844,681 + -0.7 1,844,681 + -0.4 1,844,691 + -2.3 1,844,759 - DVU1782 0.12 -0.3 1,844,795 - DVU1782 0.15 -0.2 1,844,841 + DVU1782 0.18 -0.9 1,844,865 + DVU1782 0.20 -0.1 1,844,891 + DVU1782 0.21 -1.3 1,844,914 + DVU1782 0.23 -1.1 1,845,044 - DVU1782 0.32 -0.3 1,845,088 + DVU1782 0.35 -0.1 1,845,098 + DVU1782 0.36 -1.3 1,845,106 - DVU1782 0.36 -0.8 1,845,300 + DVU1782 0.50 +1.6 1,845,476 - DVU1782 0.62 +1.2 1,845,558 + DVU1782 0.68 -0.8 1,845,599 + DVU1782 0.71 -0.4 1,845,692 + DVU1782 0.77 -0.3 1,845,728 - DVU1782 0.80 -0.0 1,845,736 - DVU1782 0.81 -1.2 1,845,803 + DVU1782 0.85 -1.5 1,845,822 - DVU1782 0.87 -1.1 1,845,855 - DVU1782 0.89 +1.6 1,845,860 + DVU1782 0.89 -1.3 1,845,868 - DVU1782 0.90 -0.5 1,845,929 - +1.5 1,845,998 - -1.0 1,846,033 - -0.8 1,846,048 + -0.4 1,846,048 + -0.0 1,846,053 + -1.1 1,846,243 + DVU1783 0.31 +2.5 1,846,314 + DVU1783 0.41 -0.4 1,846,355 + DVU1783 0.46 -1.5 1,846,491 - DVU1783 0.64 -1.0 1,846,528 - DVU1783 0.69 -1.7 1,846,618 - DVU1783 0.81 -0.4 1,846,633 + DVU1783 0.83 +3.5 1,846,730 + +0.7 1,846,738 - -1.2 1,846,738 - +0.1 1,846,768 - -0.0 1,846,787 + +0.1 1,846,886 + -1.5 1,846,914 + +1.3 1,846,929 - +1.6 1,846,930 + -1.6 1,846,938 - -0.6
Or see this region's nucleotide sequence