Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0065 and DVU0066 are separated by 214 nucleotides DVU0066 and DVU0067 are separated by 170 nucleotides DVU0067 and DVU0068 are separated by 376 nucleotides
DVU0065: DVU0065 - hypothetical protein (TIGR), at 77,110 to 77,907
DVU0065
DVU0066: DVU0066 - cytidine/deoxycytidylate deaminase domain protein (TIGR), at 78,122 to 78,691
DVU0066
DVU0067: DVU0067 - hypothetical protein (TIGR), at 78,862 to 79,170
DVU0067
DVU0068: DVU0068 - conserved hypothetical protein (TIGR), at 79,547 to 81,082
DVU0068
Position (kb)
78
79 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 77.143 kb on - strand at 77.143 kb on - strand at 77.223 kb on - strand, within DVU0065 at 77.229 kb on + strand, within DVU0065 at 77.255 kb on + strand, within DVU0065 at 77.257 kb on + strand, within DVU0065 at 77.262 kb on + strand, within DVU0065 at 77.265 kb on - strand, within DVU0065 at 77.265 kb on - strand, within DVU0065 at 77.265 kb on - strand, within DVU0065 at 77.310 kb on - strand, within DVU0065 at 77.383 kb on - strand, within DVU0065 at 77.387 kb on + strand, within DVU0065 at 77.393 kb on - strand, within DVU0065 at 77.395 kb on - strand, within DVU0065 at 77.405 kb on - strand, within DVU0065 at 77.552 kb on + strand, within DVU0065 at 77.565 kb on - strand, within DVU0065 at 77.566 kb on + strand, within DVU0065 at 77.568 kb on - strand, within DVU0065 at 77.616 kb on + strand, within DVU0065 at 77.626 kb on + strand, within DVU0065 at 77.629 kb on - strand, within DVU0065 at 77.639 kb on + strand, within DVU0065 at 77.653 kb on - strand, within DVU0065 at 77.664 kb on + strand, within DVU0065 at 77.665 kb on - strand, within DVU0065 at 77.728 kb on + strand, within DVU0065 at 77.754 kb on + strand, within DVU0065 at 77.797 kb on + strand, within DVU0065 at 77.815 kb on + strand, within DVU0065 at 77.823 kb on - strand, within DVU0065 at 77.844 kb on - strand at 77.851 kb on - strand at 77.918 kb on - strand at 77.936 kb on - strand at 77.961 kb on + strand at 77.969 kb on - strand at 77.976 kb on + strand at 77.984 kb on - strand at 78.000 kb on + strand at 78.033 kb on - strand at 78.116 kb on - strand at 78.116 kb on - strand at 78.223 kb on - strand, within DVU0066 at 78.266 kb on + strand, within DVU0066 at 78.370 kb on + strand, within DVU0066 at 78.407 kb on + strand, within DVU0066 at 78.415 kb on - strand, within DVU0066 at 78.442 kb on - strand, within DVU0066 at 78.442 kb on - strand, within DVU0066 at 78.442 kb on - strand, within DVU0066 at 78.470 kb on + strand, within DVU0066 at 78.470 kb on + strand, within DVU0066 at 78.470 kb on + strand, within DVU0066 at 78.509 kb on + strand, within DVU0066 at 78.509 kb on + strand, within DVU0066 at 78.533 kb on + strand, within DVU0066 at 78.573 kb on - strand, within DVU0066 at 78.575 kb on + strand, within DVU0066 at 78.646 kb on + strand at 78.651 kb on + strand at 78.654 kb on - strand at 78.886 kb on + strand at 78.894 kb on - strand, within DVU0067 at 78.894 kb on - strand, within DVU0067 at 78.964 kb on + strand, within DVU0067 at 78.980 kb on - strand, within DVU0067 at 78.987 kb on - strand, within DVU0067 at 79.009 kb on - strand, within DVU0067 at 79.100 kb on - strand, within DVU0067 at 79.117 kb on - strand, within DVU0067 at 79.134 kb on - strand, within DVU0067 at 79.211 kb on + strand at 79.288 kb on + strand at 79.353 kb on + strand at 79.360 kb on - strand at 79.394 kb on - strand at 79.533 kb on - strand at 79.591 kb on - strand at 79.606 kb on - strand at 79.615 kb on + strand at 79.615 kb on + strand at 79.615 kb on + strand at 79.615 kb on + strand at 79.623 kb on - strand at 79.623 kb on - strand at 79.677 kb on + strand at 79.685 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 77,143 - +1.3 77,143 - +2.0 77,223 - DVU0065 0.14 -0.7 77,229 + DVU0065 0.15 -2.4 77,255 + DVU0065 0.18 +0.4 77,257 + DVU0065 0.18 -1.3 77,262 + DVU0065 0.19 -1.2 77,265 - DVU0065 0.19 +1.6 77,265 - DVU0065 0.19 +0.3 77,265 - DVU0065 0.19 -1.9 77,310 - DVU0065 0.25 -0.2 77,383 - DVU0065 0.34 -0.1 77,387 + DVU0065 0.35 +2.9 77,393 - DVU0065 0.35 -0.2 77,395 - DVU0065 0.36 -1.2 77,405 - DVU0065 0.37 -0.0 77,552 + DVU0065 0.55 -0.7 77,565 - DVU0065 0.57 -1.2 77,566 + DVU0065 0.57 -1.8 77,568 - DVU0065 0.57 +0.7 77,616 + DVU0065 0.63 +2.0 77,626 + DVU0065 0.65 +0.8 77,629 - DVU0065 0.65 -1.4 77,639 + DVU0065 0.66 -1.1 77,653 - DVU0065 0.68 -0.5 77,664 + DVU0065 0.69 -1.9 77,665 - DVU0065 0.70 -0.5 77,728 + DVU0065 0.77 -0.3 77,754 + DVU0065 0.81 +0.9 77,797 + DVU0065 0.86 +1.6 77,815 + DVU0065 0.88 +0.1 77,823 - DVU0065 0.89 -1.3 77,844 - +0.0 77,851 - +0.8 77,918 - +0.1 77,936 - -0.4 77,961 + -1.9 77,969 - -2.4 77,976 + -1.6 77,984 - -0.2 78,000 + -0.6 78,033 - -0.6 78,116 - -1.4 78,116 - +0.5 78,223 - DVU0066 0.18 -0.7 78,266 + DVU0066 0.25 -0.9 78,370 + DVU0066 0.44 +2.0 78,407 + DVU0066 0.50 +0.4 78,415 - DVU0066 0.51 +0.4 78,442 - DVU0066 0.56 +0.1 78,442 - DVU0066 0.56 -0.0 78,442 - DVU0066 0.56 +0.9 78,470 + DVU0066 0.61 +1.3 78,470 + DVU0066 0.61 +3.4 78,470 + DVU0066 0.61 -1.2 78,509 + DVU0066 0.68 -0.2 78,509 + DVU0066 0.68 -1.7 78,533 + DVU0066 0.72 -1.0 78,573 - DVU0066 0.79 -0.6 78,575 + DVU0066 0.79 -3.2 78,646 + +0.1 78,651 + +1.9 78,654 - -3.9 78,886 + -2.4 78,894 - DVU0067 0.10 -0.3 78,894 - DVU0067 0.10 +0.3 78,964 + DVU0067 0.33 -0.4 78,980 - DVU0067 0.38 +0.3 78,987 - DVU0067 0.40 +1.0 79,009 - DVU0067 0.48 -2.0 79,100 - DVU0067 0.77 +0.8 79,117 - DVU0067 0.83 +0.6 79,134 - DVU0067 0.88 +0.1 79,211 + -0.8 79,288 + +2.6 79,353 + -1.4 79,360 - -0.3 79,394 - -0.2 79,533 - +1.3 79,591 - +2.0 79,606 - -2.9 79,615 + -0.9 79,615 + +0.1 79,615 + +0.5 79,615 + +3.7 79,623 - -1.0 79,623 - +1.6 79,677 + +0.6 79,685 - +0.5
Or see this region's nucleotide sequence