Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt frdB and DVU3264 are separated by 385 nucleotides DVU3264 and DVU3265 overlap by 1 nucleotides DVU3265 and DVU3266 are separated by 263 nucleotides
DVU3263: frdB - fumarate reductase, iron-sulfur protein (TIGR), at 3,438,819 to 3,439,562
frdB
DVU3264: DVU3264 - tartrate dehydratase alpha subunit, putative (TIGR), at 3,439,948 to 3,440,787
DVU3264
DVU3265: DVU3265 - tartrate dehydratase beta subunit, putative (TIGR), at 3,440,787 to 3,441,338
DVU3265
DVU3266: DVU3266 - conserved hypothetical protein (TIGR), at 3,441,602 to 3,442,393
DVU3266
Position (kb)
3439
3440
3441 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3438.954 kb on + strand, within frdB at 3438.962 kb on - strand, within frdB at 3438.962 kb on - strand, within frdB at 3439.038 kb on + strand, within frdB at 3439.078 kb on + strand, within frdB at 3439.095 kb on + strand, within frdB at 3439.145 kb on + strand, within frdB at 3439.161 kb on - strand, within frdB at 3439.179 kb on + strand, within frdB at 3439.194 kb on - strand, within frdB at 3439.328 kb on - strand, within frdB at 3439.388 kb on + strand, within frdB at 3439.396 kb on - strand, within frdB at 3439.414 kb on + strand, within frdB at 3439.446 kb on - strand, within frdB at 3439.567 kb on + strand at 3439.606 kb on + strand at 3439.714 kb on - strand at 3439.718 kb on + strand at 3439.767 kb on - strand at 3439.768 kb on - strand at 3439.813 kb on - strand at 3439.862 kb on + strand at 3439.881 kb on + strand at 3439.992 kb on + strand at 3439.992 kb on + strand at 3439.992 kb on + strand at 3439.997 kb on + strand at 3440.021 kb on + strand at 3440.031 kb on + strand at 3440.106 kb on - strand, within DVU3264 at 3440.108 kb on - strand, within DVU3264 at 3440.136 kb on + strand, within DVU3264 at 3440.252 kb on - strand, within DVU3264 at 3440.420 kb on + strand, within DVU3264 at 3440.428 kb on - strand, within DVU3264 at 3440.439 kb on - strand, within DVU3264 at 3440.439 kb on - strand, within DVU3264 at 3440.482 kb on - strand, within DVU3264 at 3440.548 kb on - strand, within DVU3264 at 3440.567 kb on - strand, within DVU3264 at 3440.648 kb on + strand, within DVU3264 at 3440.801 kb on - strand at 3440.820 kb on - strand at 3440.840 kb on + strand at 3440.856 kb on + strand, within DVU3265 at 3440.873 kb on + strand, within DVU3265 at 3440.881 kb on - strand, within DVU3265 at 3440.881 kb on - strand, within DVU3265 at 3440.916 kb on + strand, within DVU3265 at 3440.949 kb on - strand, within DVU3265 at 3440.978 kb on + strand, within DVU3265 at 3440.983 kb on + strand, within DVU3265 at 3441.054 kb on - strand, within DVU3265 at 3441.116 kb on + strand, within DVU3265 at 3441.229 kb on + strand, within DVU3265 at 3441.241 kb on + strand, within DVU3265 at 3441.255 kb on + strand, within DVU3265 at 3441.263 kb on - strand, within DVU3265 at 3441.263 kb on - strand, within DVU3265 at 3441.263 kb on - strand, within DVU3265 at 3441.320 kb on - strand at 3441.369 kb on + strand at 3441.369 kb on + strand at 3441.382 kb on - strand at 3441.508 kb on + strand at 3441.590 kb on - strand at 3441.607 kb on + strand at 3441.625 kb on - strand at 3441.677 kb on - strand at 3441.712 kb on - strand, within DVU3266 at 3441.757 kb on - strand, within DVU3266
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 3,438,954 + frdB DVU3263 0.18 -1.9 3,438,962 - frdB DVU3263 0.19 +2.7 3,438,962 - frdB DVU3263 0.19 -0.4 3,439,038 + frdB DVU3263 0.29 -2.2 3,439,078 + frdB DVU3263 0.35 -1.2 3,439,095 + frdB DVU3263 0.37 -0.7 3,439,145 + frdB DVU3263 0.44 +2.8 3,439,161 - frdB DVU3263 0.46 +0.3 3,439,179 + frdB DVU3263 0.48 +0.5 3,439,194 - frdB DVU3263 0.50 -0.6 3,439,328 - frdB DVU3263 0.68 +0.1 3,439,388 + frdB DVU3263 0.76 +0.3 3,439,396 - frdB DVU3263 0.78 -0.6 3,439,414 + frdB DVU3263 0.80 -0.6 3,439,446 - frdB DVU3263 0.84 -0.6 3,439,567 + +0.8 3,439,606 + -1.9 3,439,714 - +3.1 3,439,718 + -0.8 3,439,767 - +0.0 3,439,768 - -0.3 3,439,813 - -0.9 3,439,862 + +0.1 3,439,881 + -1.4 3,439,992 + +0.7 3,439,992 + -1.6 3,439,992 + -1.5 3,439,997 + +0.4 3,440,021 + +2.1 3,440,031 + -0.2 3,440,106 - DVU3264 0.19 -1.9 3,440,108 - DVU3264 0.19 -1.1 3,440,136 + DVU3264 0.22 -1.7 3,440,252 - DVU3264 0.36 -1.1 3,440,420 + DVU3264 0.56 -2.6 3,440,428 - DVU3264 0.57 -2.5 3,440,439 - DVU3264 0.58 -1.0 3,440,439 - DVU3264 0.58 -0.3 3,440,482 - DVU3264 0.64 -1.1 3,440,548 - DVU3264 0.71 -2.0 3,440,567 - DVU3264 0.74 +2.7 3,440,648 + DVU3264 0.83 -1.0 3,440,801 - -0.7 3,440,820 - -0.3 3,440,840 + -2.5 3,440,856 + DVU3265 0.12 -2.2 3,440,873 + DVU3265 0.16 +0.1 3,440,881 - DVU3265 0.17 +1.7 3,440,881 - DVU3265 0.17 -1.5 3,440,916 + DVU3265 0.23 -0.7 3,440,949 - DVU3265 0.29 +0.2 3,440,978 + DVU3265 0.35 -0.1 3,440,983 + DVU3265 0.36 +1.7 3,441,054 - DVU3265 0.48 -1.4 3,441,116 + DVU3265 0.60 -1.4 3,441,229 + DVU3265 0.80 -2.3 3,441,241 + DVU3265 0.82 -2.8 3,441,255 + DVU3265 0.85 -1.1 3,441,263 - DVU3265 0.86 +0.7 3,441,263 - DVU3265 0.86 -0.2 3,441,263 - DVU3265 0.86 -0.1 3,441,320 - -0.5 3,441,369 + -0.3 3,441,369 + +0.2 3,441,382 - -3.7 3,441,508 + +2.6 3,441,590 - -0.4 3,441,607 + -1.0 3,441,625 - +1.8 3,441,677 - +1.6 3,441,712 - DVU3266 0.14 -0.4 3,441,757 - DVU3266 0.20 +1.1
Or see this region's nucleotide sequence