Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3152 and DVU3153 are separated by 435 nucleotides DVU3153 and DVU3154 overlap by 4 nucleotides DVU3154 and dcrH are separated by 475 nucleotides
DVU3152: DVU3152 - sensory box histidine kinase (TIGR), at 3,304,918 to 3,306,579
DVU3152
DVU3153: DVU3153 - hypothetical protein (TIGR), at 3,307,015 to 3,307,134
DVU3153
DVU3154: DVU3154 - HAM1 family protein (TIGR), at 3,307,131 to 3,307,754
DVU3154
DVU3155: dcrH - methyl-accepting chemotaxis protein DcrH (TIGR), at 3,308,230 to 3,311,121
dcrH
Position (kb)
3307
3308 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3306.135 kb on - strand, within DVU3152 at 3306.158 kb on + strand, within DVU3152 at 3306.158 kb on + strand, within DVU3152 at 3306.163 kb on + strand, within DVU3152 at 3306.173 kb on + strand, within DVU3152 at 3306.175 kb on + strand, within DVU3152 at 3306.175 kb on + strand, within DVU3152 at 3306.229 kb on - strand, within DVU3152 at 3306.229 kb on - strand, within DVU3152 at 3306.242 kb on - strand, within DVU3152 at 3306.259 kb on + strand, within DVU3152 at 3306.267 kb on - strand, within DVU3152 at 3306.370 kb on - strand, within DVU3152 at 3306.428 kb on + strand at 3306.428 kb on + strand at 3306.428 kb on + strand at 3306.436 kb on - strand at 3306.480 kb on - strand at 3306.573 kb on + strand at 3306.591 kb on + strand at 3306.599 kb on - strand at 3306.599 kb on - strand at 3306.634 kb on + strand at 3306.634 kb on - strand at 3306.659 kb on - strand at 3306.693 kb on + strand at 3306.693 kb on + strand at 3306.701 kb on - strand at 3306.709 kb on + strand at 3306.738 kb on + strand at 3306.746 kb on - strand at 3306.754 kb on + strand at 3306.768 kb on - strand at 3306.799 kb on + strand at 3306.799 kb on + strand at 3306.799 kb on + strand at 3306.799 kb on + strand at 3306.799 kb on + strand at 3306.855 kb on - strand at 3306.874 kb on + strand at 3306.882 kb on + strand at 3306.890 kb on - strand at 3306.927 kb on + strand at 3306.932 kb on + strand at 3306.940 kb on + strand at 3306.948 kb on - strand at 3306.950 kb on + strand at 3306.963 kb on - strand at 3307.020 kb on - strand at 3307.026 kb on + strand at 3307.053 kb on - strand, within DVU3153 at 3307.058 kb on - strand, within DVU3153 at 3307.083 kb on + strand, within DVU3153 at 3307.096 kb on + strand, within DVU3153 at 3307.124 kb on - strand at 3307.124 kb on - strand at 3307.127 kb on + strand at 3307.135 kb on - strand at 3307.758 kb on - strand at 3307.758 kb on - strand at 3307.785 kb on - strand at 3307.854 kb on - strand at 3307.887 kb on - strand at 3307.998 kb on + strand at 3308.018 kb on + strand at 3308.045 kb on - strand at 3308.045 kb on - strand at 3308.045 kb on - strand at 3308.045 kb on - strand at 3308.057 kb on + strand at 3308.071 kb on - strand at 3308.106 kb on + strand at 3308.117 kb on + strand at 3308.117 kb on + strand at 3308.117 kb on + strand at 3308.117 kb on + strand at 3308.125 kb on - strand at 3308.125 kb on - strand at 3308.125 kb on - strand at 3308.125 kb on - strand at 3308.130 kb on + strand at 3308.179 kb on + strand at 3308.192 kb on - strand at 3308.211 kb on - strand at 3308.247 kb on + strand at 3308.264 kb on + strand at 3308.272 kb on - strand at 3308.282 kb on - strand at 3308.317 kb on + strand at 3308.326 kb on + strand at 3308.370 kb on - strand at 3308.375 kb on - strand at 3308.393 kb on - strand at 3308.393 kb on - strand at 3308.393 kb on - strand at 3308.418 kb on + strand at 3308.430 kb on + strand at 3308.433 kb on - strand at 3308.438 kb on - strand at 3308.438 kb on - strand at 3308.453 kb on - strand at 3308.477 kb on - strand at 3308.545 kb on + strand, within dcrH at 3308.549 kb on + strand, within dcrH at 3308.608 kb on + strand, within dcrH at 3308.623 kb on + strand, within dcrH at 3308.651 kb on - strand, within dcrH at 3308.651 kb on - strand, within dcrH at 3308.652 kb on + strand, within dcrH at 3308.732 kb on + strand, within dcrH at 3308.733 kb on + strand, within dcrH at 3308.733 kb on + strand, within dcrH at 3308.740 kb on - strand, within dcrH at 3308.740 kb on - strand, within dcrH at 3308.747 kb on + strand, within dcrH
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 3,306,135 - DVU3152 0.73 -0.2 3,306,158 + DVU3152 0.75 -0.9 3,306,158 + DVU3152 0.75 +1.2 3,306,163 + DVU3152 0.75 -1.7 3,306,173 + DVU3152 0.76 +0.6 3,306,175 + DVU3152 0.76 -1.5 3,306,175 + DVU3152 0.76 -0.7 3,306,229 - DVU3152 0.79 -1.9 3,306,229 - DVU3152 0.79 -1.8 3,306,242 - DVU3152 0.80 +0.2 3,306,259 + DVU3152 0.81 -0.8 3,306,267 - DVU3152 0.81 -0.3 3,306,370 - DVU3152 0.87 +0.9 3,306,428 + +2.6 3,306,428 + -0.8 3,306,428 + +0.6 3,306,436 - -2.6 3,306,480 - +0.7 3,306,573 + -1.8 3,306,591 + +0.3 3,306,599 - +0.6 3,306,599 - -1.4 3,306,634 + +0.0 3,306,634 - -2.7 3,306,659 - +0.3 3,306,693 + -1.5 3,306,693 + -1.8 3,306,701 - +0.0 3,306,709 + -2.1 3,306,738 + -0.1 3,306,746 - +1.6 3,306,754 + -1.1 3,306,768 - +0.5 3,306,799 + +0.5 3,306,799 + +2.6 3,306,799 + -0.7 3,306,799 + -2.1 3,306,799 + -1.9 3,306,855 - -0.5 3,306,874 + +2.0 3,306,882 + -1.3 3,306,890 - +2.6 3,306,927 + +1.4 3,306,932 + -0.1 3,306,940 + -1.4 3,306,948 - -1.8 3,306,950 + -0.6 3,306,963 - +3.9 3,307,020 - -2.5 3,307,026 + -2.6 3,307,053 - DVU3153 0.32 -2.3 3,307,058 - DVU3153 0.36 -1.6 3,307,083 + DVU3153 0.57 -0.6 3,307,096 + DVU3153 0.68 +1.0 3,307,124 - -3.9 3,307,124 - -1.6 3,307,127 + -1.3 3,307,135 - -1.2 3,307,758 - +0.1 3,307,758 - +0.2 3,307,785 - +1.5 3,307,854 - -0.5 3,307,887 - +0.7 3,307,998 + +1.6 3,308,018 + -0.4 3,308,045 - +0.3 3,308,045 - +1.0 3,308,045 - +1.1 3,308,045 - -1.2 3,308,057 + +2.4 3,308,071 - +0.1 3,308,106 + +1.0 3,308,117 + -1.1 3,308,117 + -1.0 3,308,117 + -2.7 3,308,117 + +0.8 3,308,125 - -2.4 3,308,125 - -0.2 3,308,125 - -1.2 3,308,125 - -0.6 3,308,130 + -2.1 3,308,179 + +1.6 3,308,192 - -2.4 3,308,211 - -2.4 3,308,247 + -0.8 3,308,264 + -2.0 3,308,272 - -0.1 3,308,282 - +0.0 3,308,317 + -1.1 3,308,326 + -0.1 3,308,370 - -0.8 3,308,375 - -0.9 3,308,393 - +1.6 3,308,393 - -0.3 3,308,393 - -1.1 3,308,418 + +0.8 3,308,430 + +0.8 3,308,433 - +1.0 3,308,438 - -1.7 3,308,438 - +0.0 3,308,453 - -1.4 3,308,477 - -0.7 3,308,545 + dcrH DVU3155 0.11 -0.6 3,308,549 + dcrH DVU3155 0.11 +0.8 3,308,608 + dcrH DVU3155 0.13 +0.5 3,308,623 + dcrH DVU3155 0.14 -1.2 3,308,651 - dcrH DVU3155 0.15 -3.9 3,308,651 - dcrH DVU3155 0.15 -0.7 3,308,652 + dcrH DVU3155 0.15 -1.1 3,308,732 + dcrH DVU3155 0.17 +1.6 3,308,733 + dcrH DVU3155 0.17 -0.8 3,308,733 + dcrH DVU3155 0.17 +0.8 3,308,740 - dcrH DVU3155 0.18 +0.1 3,308,740 - dcrH DVU3155 0.18 -3.7 3,308,747 + dcrH DVU3155 0.18 +0.9
Or see this region's nucleotide sequence