Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3031 and DVU3032 overlap by 4 nucleotides DVU3032 and DVU3033 are separated by 3 nucleotides DVU3033 and DVU3035 are separated by 191 nucleotides
DVU3031: DVU3031 - conserved hypothetical protein (TIGR), at 3,155,664 to 3,156,755
DVU3031
DVU3032: DVU3032 - conserved hypothetical protein (TIGR), at 3,156,752 to 3,157,381
DVU3032
DVU3033: DVU3033 - iron-sulfur cluster-binding protein (TIGR), at 3,157,385 to 3,159,538
DVU3033
DVU3035: DVU3035 - methyl-accepting chemotaxis protein, putative (TIGR), at 3,159,730 to 3,161,541
DVU3035
Position (kb)
3157
3158
3159
3160 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3156.528 kb on - strand, within DVU3031 at 3156.542 kb on + strand, within DVU3031 at 3156.607 kb on - strand, within DVU3031 at 3156.648 kb on - strand at 3156.656 kb on + strand at 3156.761 kb on + strand at 3156.792 kb on + strand at 3156.832 kb on - strand, within DVU3032 at 3156.863 kb on - strand, within DVU3032 at 3157.002 kb on + strand, within DVU3032 at 3157.049 kb on + strand, within DVU3032 at 3157.143 kb on + strand, within DVU3032 at 3157.235 kb on - strand, within DVU3032 at 3157.288 kb on - strand, within DVU3032 at 3157.342 kb on - strand at 3157.383 kb on - strand at 3157.383 kb on - strand at 3157.383 kb on - strand at 3157.401 kb on - strand at 3157.597 kb on + strand at 3157.597 kb on + strand at 3157.597 kb on + strand at 3157.597 kb on + strand at 3157.597 kb on + strand at 3157.605 kb on - strand, within DVU3033 at 3157.605 kb on - strand, within DVU3033 at 3157.623 kb on + strand, within DVU3033 at 3157.631 kb on - strand, within DVU3033 at 3157.763 kb on - strand, within DVU3033 at 3157.885 kb on + strand, within DVU3033 at 3157.964 kb on + strand, within DVU3033 at 3158.069 kb on + strand, within DVU3033 at 3158.110 kb on + strand, within DVU3033 at 3158.218 kb on + strand, within DVU3033 at 3158.312 kb on + strand, within DVU3033 at 3158.312 kb on + strand, within DVU3033 at 3158.400 kb on - strand, within DVU3033 at 3158.470 kb on - strand, within DVU3033 at 3158.505 kb on - strand, within DVU3033 at 3158.569 kb on - strand, within DVU3033 at 3158.796 kb on + strand, within DVU3033 at 3158.826 kb on - strand, within DVU3033 at 3158.847 kb on + strand, within DVU3033 at 3158.857 kb on + strand, within DVU3033 at 3158.860 kb on - strand, within DVU3033 at 3158.865 kb on - strand, within DVU3033 at 3158.865 kb on - strand, within DVU3033 at 3158.915 kb on + strand, within DVU3033 at 3158.923 kb on - strand, within DVU3033 at 3158.925 kb on + strand, within DVU3033 at 3158.952 kb on - strand, within DVU3033 at 3158.996 kb on + strand, within DVU3033 at 3159.024 kb on + strand, within DVU3033 at 3159.031 kb on + strand, within DVU3033 at 3159.055 kb on + strand, within DVU3033 at 3159.069 kb on + strand, within DVU3033 at 3159.069 kb on + strand, within DVU3033 at 3159.069 kb on + strand, within DVU3033 at 3159.069 kb on + strand, within DVU3033 at 3159.077 kb on - strand, within DVU3033 at 3159.087 kb on - strand, within DVU3033 at 3159.087 kb on - strand, within DVU3033 at 3159.238 kb on - strand, within DVU3033 at 3159.441 kb on - strand at 3159.490 kb on + strand at 3159.551 kb on - strand at 3159.637 kb on + strand at 3159.664 kb on + strand at 3159.672 kb on - strand at 3159.682 kb on - strand at 3159.686 kb on + strand at 3159.691 kb on + strand at 3159.868 kb on + strand at 3159.977 kb on - strand, within DVU3035 at 3160.014 kb on + strand, within DVU3035 at 3160.037 kb on - strand, within DVU3035 at 3160.081 kb on + strand, within DVU3035 at 3160.128 kb on - strand, within DVU3035 at 3160.161 kb on + strand, within DVU3035 at 3160.220 kb on - strand, within DVU3035 at 3160.373 kb on + strand, within DVU3035 at 3160.461 kb on - strand, within DVU3035 at 3160.508 kb on - strand, within DVU3035 at 3160.531 kb on + strand, within DVU3035 at 3160.531 kb on + strand, within DVU3035
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 3,156,528 - DVU3031 0.79 -2.2 3,156,542 + DVU3031 0.80 +1.0 3,156,607 - DVU3031 0.86 -0.1 3,156,648 - -3.6 3,156,656 + -0.8 3,156,761 + +0.5 3,156,792 + -0.1 3,156,832 - DVU3032 0.13 -1.9 3,156,863 - DVU3032 0.18 +2.0 3,157,002 + DVU3032 0.40 -1.0 3,157,049 + DVU3032 0.47 +0.5 3,157,143 + DVU3032 0.62 -0.6 3,157,235 - DVU3032 0.77 -1.6 3,157,288 - DVU3032 0.85 -0.4 3,157,342 - -1.5 3,157,383 - +2.8 3,157,383 - -0.4 3,157,383 - -1.3 3,157,401 - +1.5 3,157,597 + -0.9 3,157,597 + -0.9 3,157,597 + -1.4 3,157,597 + +2.3 3,157,597 + -2.0 3,157,605 - DVU3033 0.10 -0.5 3,157,605 - DVU3033 0.10 -0.1 3,157,623 + DVU3033 0.11 -0.0 3,157,631 - DVU3033 0.11 -1.8 3,157,763 - DVU3033 0.18 -1.4 3,157,885 + DVU3033 0.23 -1.7 3,157,964 + DVU3033 0.27 -1.2 3,158,069 + DVU3033 0.32 -1.3 3,158,110 + DVU3033 0.34 -1.1 3,158,218 + DVU3033 0.39 -1.4 3,158,312 + DVU3033 0.43 -0.9 3,158,312 + DVU3033 0.43 -2.2 3,158,400 - DVU3033 0.47 +0.2 3,158,470 - DVU3033 0.50 +0.2 3,158,505 - DVU3033 0.52 -1.6 3,158,569 - DVU3033 0.55 -0.8 3,158,796 + DVU3033 0.66 -0.9 3,158,826 - DVU3033 0.67 +0.8 3,158,847 + DVU3033 0.68 -1.9 3,158,857 + DVU3033 0.68 -1.4 3,158,860 - DVU3033 0.68 +3.6 3,158,865 - DVU3033 0.69 -3.3 3,158,865 - DVU3033 0.69 -2.2 3,158,915 + DVU3033 0.71 -0.8 3,158,923 - DVU3033 0.71 +0.5 3,158,925 + DVU3033 0.71 -1.7 3,158,952 - DVU3033 0.73 -1.0 3,158,996 + DVU3033 0.75 -0.6 3,159,024 + DVU3033 0.76 +1.5 3,159,031 + DVU3033 0.76 -1.2 3,159,055 + DVU3033 0.78 -1.1 3,159,069 + DVU3033 0.78 -0.2 3,159,069 + DVU3033 0.78 +0.6 3,159,069 + DVU3033 0.78 -2.5 3,159,069 + DVU3033 0.78 -0.2 3,159,077 - DVU3033 0.79 -1.1 3,159,087 - DVU3033 0.79 -2.8 3,159,087 - DVU3033 0.79 +0.3 3,159,238 - DVU3033 0.86 +1.6 3,159,441 - -1.5 3,159,490 + -1.4 3,159,551 - -0.5 3,159,637 + +0.2 3,159,664 + +0.5 3,159,672 - -2.2 3,159,682 - +2.0 3,159,686 + +0.2 3,159,691 + -0.5 3,159,868 + +0.7 3,159,977 - DVU3035 0.14 -0.7 3,160,014 + DVU3035 0.16 -0.2 3,160,037 - DVU3035 0.17 +1.0 3,160,081 + DVU3035 0.19 -0.4 3,160,128 - DVU3035 0.22 -1.4 3,160,161 + DVU3035 0.24 +0.0 3,160,220 - DVU3035 0.27 +0.3 3,160,373 + DVU3035 0.35 +1.6 3,160,461 - DVU3035 0.40 -0.3 3,160,508 - DVU3035 0.43 -0.7 3,160,531 + DVU3035 0.44 +1.0 3,160,531 + DVU3035 0.44 -0.3
Or see this region's nucleotide sequence