Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dcm and vsr are separated by 8 nucleotides vsr and DVU2844 are separated by 16 nucleotides DVU2844 and hit are separated by 7 nucleotides
DVU2842: dcm - type II DNA modification methyltransferase, putative (TIGR), at 2,946,324 to 2,947,400
dcm
DVU2843: vsr - DNA mismatch endonuclease Vsr, putative (TIGR), at 2,947,409 to 2,947,819
vsr
DVU2844: DVU2844 - hypothetical protein (TIGR), at 2,947,836 to 2,948,699
DVU2844
DVU2845: hit - HIT family protein (TIGR), at 2,948,707 to 2,949,135
hit
Position (kb)
2947
2948 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2947.418 kb on + strand at 2947.463 kb on - strand, within vsr at 2947.478 kb on - strand, within vsr at 2947.541 kb on + strand, within vsr at 2947.552 kb on - strand, within vsr at 2947.726 kb on - strand, within vsr at 2947.775 kb on + strand, within vsr at 2948.003 kb on - strand, within DVU2844 at 2948.076 kb on - strand, within DVU2844 at 2948.119 kb on + strand, within DVU2844 at 2948.171 kb on - strand, within DVU2844 at 2948.228 kb on - strand, within DVU2844 at 2948.235 kb on - strand, within DVU2844 at 2948.241 kb on - strand, within DVU2844 at 2948.388 kb on - strand, within DVU2844 at 2948.390 kb on + strand, within DVU2844 at 2948.398 kb on - strand, within DVU2844 at 2948.430 kb on + strand, within DVU2844 at 2948.438 kb on - strand, within DVU2844 at 2948.440 kb on + strand, within DVU2844 at 2948.530 kb on - strand, within DVU2844 at 2948.548 kb on + strand, within DVU2844 at 2948.589 kb on + strand, within DVU2844 at 2948.600 kb on + strand, within DVU2844 at 2948.666 kb on + strand at 2948.739 kb on + strand at 2948.749 kb on + strand at 2948.749 kb on + strand at 2948.751 kb on + strand, within hit
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 2,947,418 + +0.2 2,947,463 - vsr DVU2843 0.13 -1.2 2,947,478 - vsr DVU2843 0.17 -1.5 2,947,541 + vsr DVU2843 0.32 -2.8 2,947,552 - vsr DVU2843 0.35 +0.5 2,947,726 - vsr DVU2843 0.77 -1.1 2,947,775 + vsr DVU2843 0.89 -0.8 2,948,003 - DVU2844 0.19 +2.6 2,948,076 - DVU2844 0.28 -0.9 2,948,119 + DVU2844 0.33 -0.5 2,948,171 - DVU2844 0.39 -2.0 2,948,228 - DVU2844 0.45 -0.3 2,948,235 - DVU2844 0.46 -0.7 2,948,241 - DVU2844 0.47 +2.6 2,948,388 - DVU2844 0.64 -0.8 2,948,390 + DVU2844 0.64 -0.5 2,948,398 - DVU2844 0.65 -1.3 2,948,430 + DVU2844 0.69 -0.5 2,948,438 - DVU2844 0.70 -0.3 2,948,440 + DVU2844 0.70 -0.7 2,948,530 - DVU2844 0.80 -0.1 2,948,548 + DVU2844 0.82 -1.1 2,948,589 + DVU2844 0.87 -1.0 2,948,600 + DVU2844 0.88 -2.0 2,948,666 + -0.8 2,948,739 + +1.6 2,948,749 + +2.9 2,948,749 + -1.1 2,948,751 + hit DVU2845 0.10 +1.1
Or see this region's nucleotide sequence