Experiment: MoYLS4 with Molybdate 100uM and Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gltB-1 and DVU1824 are separated by 218 nucleotides DVU1824 and DVU1825 are separated by 182 nucleotides
DVU1823: gltB-1 - glutamate synthase, iron-sulfur cluster-binding subunit, putative (TIGR), at 1,887,773 to 1,889,296
gltB-1
DVU1824: DVU1824 - conserved hypothetical protein (TIGR), at 1,889,515 to 1,890,279
DVU1824
DVU1825: DVU1825 - amidohydrolase family protein (TIGR), at 1,890,462 to 1,891,790
DVU1825
Position (kb)
1889
1890
1891 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1888.522 kb on - strand, within gltB-1 at 1888.578 kb on + strand, within gltB-1 at 1888.586 kb on - strand, within gltB-1 at 1888.647 kb on + strand, within gltB-1 at 1888.647 kb on + strand, within gltB-1 at 1888.655 kb on - strand, within gltB-1 at 1888.659 kb on + strand, within gltB-1 at 1888.669 kb on - strand, within gltB-1 at 1888.898 kb on + strand, within gltB-1 at 1888.979 kb on + strand, within gltB-1 at 1888.994 kb on - strand, within gltB-1 at 1889.017 kb on + strand, within gltB-1 at 1889.046 kb on + strand, within gltB-1 at 1889.076 kb on + strand, within gltB-1 at 1889.103 kb on + strand, within gltB-1 at 1889.150 kb on + strand at 1889.158 kb on - strand at 1889.185 kb on + strand at 1889.210 kb on + strand at 1889.344 kb on - strand at 1889.568 kb on - strand at 1889.616 kb on + strand, within DVU1824 at 1889.633 kb on + strand, within DVU1824 at 1889.756 kb on + strand, within DVU1824 at 1889.791 kb on - strand, within DVU1824 at 1889.812 kb on + strand, within DVU1824 at 1889.820 kb on - strand, within DVU1824 at 1889.856 kb on - strand, within DVU1824 at 1889.863 kb on - strand, within DVU1824 at 1889.874 kb on + strand, within DVU1824 at 1889.882 kb on - strand, within DVU1824 at 1889.902 kb on + strand, within DVU1824 at 1889.905 kb on - strand, within DVU1824 at 1889.908 kb on + strand, within DVU1824 at 1889.925 kb on - strand, within DVU1824 at 1889.932 kb on - strand, within DVU1824 at 1889.964 kb on - strand, within DVU1824 at 1889.969 kb on + strand, within DVU1824 at 1890.049 kb on + strand, within DVU1824 at 1890.075 kb on + strand, within DVU1824 at 1890.168 kb on + strand, within DVU1824 at 1890.170 kb on + strand, within DVU1824 at 1890.196 kb on - strand, within DVU1824 at 1890.202 kb on - strand, within DVU1824 at 1890.227 kb on - strand at 1890.261 kb on + strand at 1890.269 kb on - strand at 1890.306 kb on - strand at 1890.354 kb on + strand at 1890.370 kb on - strand at 1890.376 kb on + strand at 1890.473 kb on + strand at 1890.528 kb on + strand at 1890.738 kb on + strand, within DVU1825 at 1890.795 kb on + strand, within DVU1825 at 1890.894 kb on - strand, within DVU1825 at 1890.899 kb on - strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.038 kb on + strand, within DVU1825 at 1891.046 kb on - strand, within DVU1825 at 1891.046 kb on - strand, within DVU1825 at 1891.046 kb on - strand, within DVU1825 at 1891.046 kb on - strand, within DVU1825 at 1891.107 kb on + strand, within DVU1825 at 1891.109 kb on + strand, within DVU1825 at 1891.115 kb on - strand, within DVU1825 at 1891.115 kb on - strand, within DVU1825 at 1891.140 kb on + strand, within DVU1825 at 1891.197 kb on - strand, within DVU1825 at 1891.210 kb on + strand, within DVU1825 at 1891.215 kb on + strand, within DVU1825 at 1891.228 kb on + strand, within DVU1825 at 1891.258 kb on - strand, within DVU1825
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Molybdate 100uM and Tungstate 2mM remove 1,888,522 - gltB-1 DVU1823 0.49 +0.6 1,888,578 + gltB-1 DVU1823 0.53 +1.7 1,888,586 - gltB-1 DVU1823 0.53 -0.1 1,888,647 + gltB-1 DVU1823 0.57 -0.2 1,888,647 + gltB-1 DVU1823 0.57 -0.5 1,888,655 - gltB-1 DVU1823 0.58 +0.3 1,888,659 + gltB-1 DVU1823 0.58 +0.3 1,888,669 - gltB-1 DVU1823 0.59 -0.0 1,888,898 + gltB-1 DVU1823 0.74 +1.2 1,888,979 + gltB-1 DVU1823 0.79 -0.7 1,888,994 - gltB-1 DVU1823 0.80 +4.1 1,889,017 + gltB-1 DVU1823 0.82 -0.8 1,889,046 + gltB-1 DVU1823 0.84 -0.8 1,889,076 + gltB-1 DVU1823 0.85 +0.7 1,889,103 + gltB-1 DVU1823 0.87 +0.1 1,889,150 + -0.6 1,889,158 - +0.4 1,889,185 + -1.6 1,889,210 + -2.5 1,889,344 - -0.4 1,889,568 - -0.7 1,889,616 + DVU1824 0.13 +0.0 1,889,633 + DVU1824 0.15 +2.2 1,889,756 + DVU1824 0.32 +0.2 1,889,791 - DVU1824 0.36 +1.4 1,889,812 + DVU1824 0.39 -0.8 1,889,820 - DVU1824 0.40 -0.0 1,889,856 - DVU1824 0.45 +0.9 1,889,863 - DVU1824 0.45 +1.8 1,889,874 + DVU1824 0.47 +1.2 1,889,882 - DVU1824 0.48 +0.5 1,889,902 + DVU1824 0.51 -0.9 1,889,905 - DVU1824 0.51 +0.2 1,889,908 + DVU1824 0.51 +0.4 1,889,925 - DVU1824 0.54 -0.3 1,889,932 - DVU1824 0.55 +3.5 1,889,964 - DVU1824 0.59 +2.0 1,889,969 + DVU1824 0.59 +2.9 1,890,049 + DVU1824 0.70 +1.7 1,890,075 + DVU1824 0.73 +1.3 1,890,168 + DVU1824 0.85 +0.3 1,890,170 + DVU1824 0.86 -0.1 1,890,196 - DVU1824 0.89 -1.2 1,890,202 - DVU1824 0.90 -0.4 1,890,227 - +0.6 1,890,261 + +0.7 1,890,269 - +0.6 1,890,306 - -0.4 1,890,354 + +1.7 1,890,370 - -0.5 1,890,376 + -0.8 1,890,473 + -1.7 1,890,528 + -0.6 1,890,738 + DVU1825 0.21 +2.0 1,890,795 + DVU1825 0.25 -1.9 1,890,894 - DVU1825 0.33 -0.7 1,890,899 - DVU1825 0.33 -1.6 1,891,038 + DVU1825 0.43 -0.5 1,891,038 + DVU1825 0.43 -0.3 1,891,038 + DVU1825 0.43 -1.2 1,891,038 + DVU1825 0.43 +0.7 1,891,038 + DVU1825 0.43 -0.3 1,891,038 + DVU1825 0.43 -1.3 1,891,038 + DVU1825 0.43 -2.6 1,891,046 - DVU1825 0.44 -0.7 1,891,046 - DVU1825 0.44 +3.6 1,891,046 - DVU1825 0.44 -1.9 1,891,046 - DVU1825 0.44 +3.7 1,891,107 + DVU1825 0.49 -0.9 1,891,109 + DVU1825 0.49 -1.4 1,891,115 - DVU1825 0.49 -1.3 1,891,115 - DVU1825 0.49 -1.0 1,891,140 + DVU1825 0.51 +0.1 1,891,197 - DVU1825 0.55 -2.8 1,891,210 + DVU1825 0.56 +0.5 1,891,215 + DVU1825 0.57 +0.4 1,891,228 + DVU1825 0.58 +0.3 1,891,258 - DVU1825 0.60 -0.1
Or see this region's nucleotide sequence