Experiment: MoLS4 with N2 gas (N) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3043 and DORF45242 are separated by 131 nucleotides DORF45242 and fexB are separated by 460 nucleotides
DVU3043: DVU3043 - hypothetical protein (TIGR), at 3,166,018 to 3,167,049
DVU3043
DORF45242: DORF45242 - no description, at 3,167,181 to 3,167,882
DORF45242
DVU3045: fexB - sensory box histidine kinase/response regulator (TIGR), at 3,168,343 to 3,171,210
fexB
Position (kb)
3167
3168 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3166.266 kb on + strand, within DVU3043 at 3166.266 kb on + strand, within DVU3043 at 3166.268 kb on + strand, within DVU3043 at 3166.274 kb on - strand, within DVU3043 at 3166.294 kb on - strand, within DVU3043 at 3166.309 kb on - strand, within DVU3043 at 3166.332 kb on - strand, within DVU3043 at 3166.366 kb on + strand, within DVU3043 at 3166.374 kb on - strand, within DVU3043 at 3166.388 kb on - strand, within DVU3043 at 3166.416 kb on + strand, within DVU3043 at 3166.433 kb on - strand, within DVU3043 at 3166.463 kb on - strand, within DVU3043 at 3166.463 kb on - strand, within DVU3043 at 3166.519 kb on - strand, within DVU3043 at 3166.521 kb on + strand, within DVU3043 at 3166.531 kb on + strand, within DVU3043 at 3166.601 kb on - strand, within DVU3043 at 3166.634 kb on - strand, within DVU3043 at 3166.726 kb on - strand, within DVU3043 at 3166.738 kb on + strand, within DVU3043 at 3166.753 kb on - strand, within DVU3043 at 3166.753 kb on - strand, within DVU3043 at 3166.860 kb on + strand, within DVU3043 at 3166.863 kb on - strand, within DVU3043 at 3167.265 kb on - strand, within DORF45242 at 3167.299 kb on - strand, within DORF45242 at 3167.339 kb on - strand, within DORF45242 at 3167.367 kb on - strand, within DORF45242 at 3167.367 kb on - strand, within DORF45242 at 3167.372 kb on + strand, within DORF45242 at 3167.394 kb on + strand, within DORF45242 at 3167.427 kb on - strand, within DORF45242 at 3167.478 kb on + strand, within DORF45242 at 3167.478 kb on - strand, within DORF45242 at 3167.486 kb on - strand, within DORF45242 at 3167.507 kb on - strand, within DORF45242 at 3167.543 kb on - strand, within DORF45242 at 3167.576 kb on - strand, within DORF45242 at 3167.616 kb on + strand, within DORF45242 at 3167.624 kb on - strand, within DORF45242 at 3167.644 kb on + strand, within DORF45242 at 3167.679 kb on + strand, within DORF45242 at 3167.680 kb on - strand, within DORF45242 at 3167.692 kb on - strand, within DORF45242 at 3167.697 kb on - strand, within DORF45242 at 3167.755 kb on + strand, within DORF45242 at 3167.822 kb on - strand at 3167.822 kb on - strand at 3167.824 kb on - strand at 3167.824 kb on - strand at 3167.866 kb on + strand at 3167.871 kb on + strand at 3167.876 kb on + strand at 3167.876 kb on + strand at 3167.876 kb on + strand at 3167.889 kb on - strand at 3167.893 kb on + strand at 3167.899 kb on - strand at 3167.944 kb on + strand at 3167.947 kb on + strand at 3167.983 kb on + strand at 3167.983 kb on + strand at 3168.002 kb on + strand at 3168.027 kb on + strand at 3168.098 kb on + strand at 3168.099 kb on - strand at 3168.104 kb on - strand at 3168.106 kb on - strand at 3168.106 kb on - strand at 3168.223 kb on + strand at 3168.285 kb on - strand at 3168.331 kb on + strand at 3168.349 kb on - strand at 3168.388 kb on - strand at 3168.416 kb on + strand at 3168.416 kb on + strand at 3168.419 kb on - strand at 3168.424 kb on - strand at 3168.512 kb on + strand at 3168.525 kb on - strand at 3168.670 kb on - strand, within fexB at 3168.718 kb on + strand, within fexB at 3168.778 kb on - strand, within fexB at 3168.803 kb on - strand, within fexB at 3168.803 kb on - strand, within fexB at 3168.841 kb on - strand, within fexB at 3168.880 kb on - strand, within fexB
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with N2 gas (N) with Tungstate 2mM remove 3,166,266 + DVU3043 0.24 +0.1 3,166,266 + DVU3043 0.24 +0.4 3,166,268 + DVU3043 0.24 -0.8 3,166,274 - DVU3043 0.25 +1.2 3,166,294 - DVU3043 0.27 +0.4 3,166,309 - DVU3043 0.28 +0.1 3,166,332 - DVU3043 0.30 +2.8 3,166,366 + DVU3043 0.34 +0.0 3,166,374 - DVU3043 0.34 +1.8 3,166,388 - DVU3043 0.36 +0.3 3,166,416 + DVU3043 0.39 +0.9 3,166,433 - DVU3043 0.40 -0.3 3,166,463 - DVU3043 0.43 -0.8 3,166,463 - DVU3043 0.43 -0.2 3,166,519 - DVU3043 0.49 -0.4 3,166,521 + DVU3043 0.49 +0.4 3,166,531 + DVU3043 0.50 -0.5 3,166,601 - DVU3043 0.56 +1.4 3,166,634 - DVU3043 0.60 -0.8 3,166,726 - DVU3043 0.69 +0.8 3,166,738 + DVU3043 0.70 +0.8 3,166,753 - DVU3043 0.71 -0.5 3,166,753 - DVU3043 0.71 +0.0 3,166,860 + DVU3043 0.82 -0.1 3,166,863 - DVU3043 0.82 -2.9 3,167,265 - DORF45242 0.12 -0.2 3,167,299 - DORF45242 0.17 +2.8 3,167,339 - DORF45242 0.23 -0.2 3,167,367 - DORF45242 0.26 +0.2 3,167,367 - DORF45242 0.26 +0.0 3,167,372 + DORF45242 0.27 -0.4 3,167,394 + DORF45242 0.30 +0.2 3,167,427 - DORF45242 0.35 +0.3 3,167,478 + DORF45242 0.42 -0.6 3,167,478 - DORF45242 0.42 -0.4 3,167,486 - DORF45242 0.43 -0.3 3,167,507 - DORF45242 0.46 +0.6 3,167,543 - DORF45242 0.52 +1.1 3,167,576 - DORF45242 0.56 +0.3 3,167,616 + DORF45242 0.62 -0.1 3,167,624 - DORF45242 0.63 +0.4 3,167,644 + DORF45242 0.66 +0.4 3,167,679 + DORF45242 0.71 -0.3 3,167,680 - DORF45242 0.71 -0.0 3,167,692 - DORF45242 0.73 -0.2 3,167,697 - DORF45242 0.74 -0.0 3,167,755 + DORF45242 0.82 -0.2 3,167,822 - -0.6 3,167,822 - +0.0 3,167,824 - +0.3 3,167,824 - -0.2 3,167,866 + +0.2 3,167,871 + +0.4 3,167,876 + -0.5 3,167,876 + +0.4 3,167,876 + +0.0 3,167,889 - +0.4 3,167,893 + -0.8 3,167,899 - -1.1 3,167,944 + -0.2 3,167,947 + -0.3 3,167,983 + -0.4 3,167,983 + +0.7 3,168,002 + -0.1 3,168,027 + -0.3 3,168,098 + -0.8 3,168,099 - -0.0 3,168,104 - +0.4 3,168,106 - -0.3 3,168,106 - -0.3 3,168,223 + +0.1 3,168,285 - -0.2 3,168,331 + +0.4 3,168,349 - -0.4 3,168,388 - -0.9 3,168,416 + -0.7 3,168,416 + -1.2 3,168,419 - -1.7 3,168,424 - -1.7 3,168,512 + -3.0 3,168,525 - -0.0 3,168,670 - fexB DVU3045 0.11 -1.4 3,168,718 + fexB DVU3045 0.13 -1.4 3,168,778 - fexB DVU3045 0.15 -2.2 3,168,803 - fexB DVU3045 0.16 -0.6 3,168,803 - fexB DVU3045 0.16 -0.9 3,168,841 - fexB DVU3045 0.17 -2.1 3,168,880 - fexB DVU3045 0.19 -1.3
Or see this region's nucleotide sequence