Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0632

Experiment: MoLS4 with N2 gas (N) with Tungstate 2mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU0631 and DVU0632 are separated by 246 nucleotidesDVU0632 and DVU0633 overlap by 1 nucleotides DVU0631: DVU0631 - conserved hypothetical protein (TIGR), at 697,251 to 698,816 DVU0631 DVU0632: DVU0632 - cupin family protein (TIGR), at 699,063 to 699,680 DVU0632 DVU0633: DVU0633 - penicillin-binding protein (TIGR), at 699,680 to 702,103 DVU0633 Position (kb) 699 700Strain fitness (log2 ratio) -1 0 1at 698.080 kb on - strand, within DVU0631at 698.185 kb on - strand, within DVU0631at 698.217 kb on + strand, within DVU0631at 698.332 kb on + strand, within DVU0631at 698.353 kb on + strand, within DVU0631at 698.391 kb on + strand, within DVU0631at 698.399 kb on - strand, within DVU0631at 698.441 kb on + strand, within DVU0631at 698.454 kb on - strand, within DVU0631at 698.508 kb on + strand, within DVU0631at 698.573 kb on + strand, within DVU0631at 698.618 kb on + strand, within DVU0631at 698.626 kb on - strand, within DVU0631at 698.672 kb on + strandat 698.676 kb on + strandat 698.680 kb on - strandat 698.693 kb on + strandat 698.824 kb on + strandat 698.886 kb on - strandat 698.890 kb on + strandat 698.995 kb on + strandat 699.005 kb on + strandat 699.008 kb on - strandat 699.008 kb on - strandat 699.120 kb on + strandat 699.150 kb on + strand, within DVU0632at 699.171 kb on + strand, within DVU0632at 699.179 kb on - strand, within DVU0632at 699.196 kb on + strand, within DVU0632at 699.221 kb on - strand, within DVU0632at 699.264 kb on + strand, within DVU0632at 699.269 kb on + strand, within DVU0632at 699.274 kb on + strand, within DVU0632at 699.274 kb on + strand, within DVU0632at 699.311 kb on - strand, within DVU0632at 699.351 kb on + strand, within DVU0632at 699.359 kb on - strand, within DVU0632at 699.551 kb on + strand, within DVU0632at 699.652 kb on + strandat 699.652 kb on + strandat 699.681 kb on + strandat 699.708 kb on - strandat 699.708 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with N2 gas (N) with Tungstate 2mM
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698,080 - DVU0631 0.53 -0.5
698,185 - DVU0631 0.60 +0.0
698,217 + DVU0631 0.62 -0.4
698,332 + DVU0631 0.69 -1.5
698,353 + DVU0631 0.70 -0.3
698,391 + DVU0631 0.73 -0.1
698,399 - DVU0631 0.73 -0.6
698,441 + DVU0631 0.76 -0.4
698,454 - DVU0631 0.77 -0.4
698,508 + DVU0631 0.80 +0.4
698,573 + DVU0631 0.84 -0.0
698,618 + DVU0631 0.87 -0.3
698,626 - DVU0631 0.88 +0.8
698,672 + -0.5
698,676 + +0.1
698,680 - +0.2
698,693 + +0.0
698,824 + -0.7
698,886 - -0.3
698,890 + -0.5
698,995 + +0.8
699,005 + -0.2
699,008 - +0.2
699,008 - +0.0
699,120 + +0.2
699,150 + DVU0632 0.14 -0.6
699,171 + DVU0632 0.17 +0.2
699,179 - DVU0632 0.19 -1.4
699,196 + DVU0632 0.22 +0.1
699,221 - DVU0632 0.26 -0.7
699,264 + DVU0632 0.33 -0.2
699,269 + DVU0632 0.33 -0.6
699,274 + DVU0632 0.34 -1.4
699,274 + DVU0632 0.34 -0.7
699,311 - DVU0632 0.40 -0.8
699,351 + DVU0632 0.47 +0.3
699,359 - DVU0632 0.48 +0.1
699,551 + DVU0632 0.79 -0.2
699,652 + -0.3
699,652 + +0.3
699,681 + -1.1
699,708 - +1.2
699,708 - -0.6

Or see this region's nucleotide sequence