Experiment: MoLS4 with N2 gas (N) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3364 and fmt are separated by 120 nucleotides fmt and def overlap by 28 nucleotides def and aspS are separated by 302 nucleotides
DVU3364: DVU3364 - conserved hypothetical protein (TIGR), at 3,534,750 to 3,535,673
DVU3364
DVU3365: fmt - methionyl-tRNA formyltransferase (TIGR), at 3,535,794 to 3,536,786
fmt
DVU3366: def - polypeptide deformylase (TIGR), at 3,536,759 to 3,537,274
def
DVU3367: aspS - aspartyl-tRNA synthetase (TIGR), at 3,537,577 to 3,539,409
aspS
Position (kb)
3535
3536
3537 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3534.835 kb on + strand at 3534.840 kb on + strand at 3534.864 kb on + strand, within DVU3364 at 3534.888 kb on - strand, within DVU3364 at 3534.952 kb on - strand, within DVU3364 at 3534.960 kb on - strand, within DVU3364 at 3534.993 kb on - strand, within DVU3364 at 3535.059 kb on + strand, within DVU3364 at 3535.143 kb on - strand, within DVU3364 at 3535.192 kb on - strand, within DVU3364 at 3535.192 kb on - strand, within DVU3364 at 3535.260 kb on + strand, within DVU3364 at 3535.294 kb on - strand, within DVU3364 at 3535.322 kb on + strand, within DVU3364 at 3535.413 kb on - strand, within DVU3364 at 3535.413 kb on - strand, within DVU3364 at 3535.451 kb on + strand, within DVU3364 at 3535.453 kb on - strand, within DVU3364 at 3535.488 kb on - strand, within DVU3364 at 3535.599 kb on - strand at 3535.670 kb on + strand at 3535.730 kb on + strand at 3535.730 kb on + strand at 3535.740 kb on - strand at 3535.758 kb on - strand at 3535.778 kb on + strand at 3535.786 kb on - strand at 3536.769 kb on - strand at 3537.285 kb on + strand at 3537.285 kb on + strand at 3537.292 kb on + strand at 3537.293 kb on - strand at 3537.293 kb on - strand at 3537.300 kb on - strand at 3537.300 kb on - strand at 3537.306 kb on + strand at 3537.324 kb on - strand at 3537.336 kb on - strand at 3537.397 kb on - strand at 3537.433 kb on + strand at 3537.457 kb on + strand at 3537.457 kb on + strand at 3537.457 kb on + strand at 3537.457 kb on + strand at 3537.465 kb on - strand at 3537.465 kb on - strand at 3537.489 kb on + strand at 3537.489 kb on + strand at 3537.497 kb on - strand at 3537.497 kb on - strand at 3537.517 kb on - strand at 3537.602 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with N2 gas (N) with Tungstate 2mM remove 3,534,835 + +0.2 3,534,840 + +0.2 3,534,864 + DVU3364 0.12 -0.1 3,534,888 - DVU3364 0.15 +1.3 3,534,952 - DVU3364 0.22 +1.0 3,534,960 - DVU3364 0.23 -0.2 3,534,993 - DVU3364 0.26 +0.5 3,535,059 + DVU3364 0.33 +0.6 3,535,143 - DVU3364 0.43 -0.2 3,535,192 - DVU3364 0.48 +0.3 3,535,192 - DVU3364 0.48 +1.6 3,535,260 + DVU3364 0.55 +0.8 3,535,294 - DVU3364 0.59 +0.4 3,535,322 + DVU3364 0.62 +1.4 3,535,413 - DVU3364 0.72 +1.2 3,535,413 - DVU3364 0.72 +1.4 3,535,451 + DVU3364 0.76 +1.6 3,535,453 - DVU3364 0.76 +2.2 3,535,488 - DVU3364 0.80 -0.9 3,535,599 - +1.5 3,535,670 + +0.4 3,535,730 + -0.6 3,535,730 + -1.2 3,535,740 - +0.8 3,535,758 - -0.7 3,535,778 + -0.6 3,535,786 - +0.1 3,536,769 - +2.8 3,537,285 + +0.3 3,537,285 + +0.6 3,537,292 + +2.2 3,537,293 - -0.9 3,537,293 - -0.9 3,537,300 - -0.8 3,537,300 - -0.9 3,537,306 + -1.9 3,537,324 - -0.4 3,537,336 - -0.3 3,537,397 - -1.7 3,537,433 + +0.0 3,537,457 + -0.3 3,537,457 + -0.2 3,537,457 + -0.4 3,537,457 + +0.4 3,537,465 - -0.5 3,537,465 - -0.0 3,537,489 + -0.1 3,537,489 + -0.2 3,537,497 - -1.0 3,537,497 - -0.6 3,537,517 - +2.0 3,537,602 + -1.4
Or see this region's nucleotide sequence