Experiment: MoLS4 with N2 gas (N) with Tungstate 2mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0097 and DVUA0098 are separated by 144 nucleotides DVUA0098 and DVUA0099 are separated by 169 nucleotides
DVUA0097: DVUA0097 - radical SAM domain protein (TIGR), at 130,707 to 132,206
DVUA0097
DVUA0098: DVUA0098 - dehydrogenase, putative (TIGR), at 132,351 to 133,400
DVUA0098
DVUA0099: DVUA0099 - HAMP domain protein (TIGR), at 133,570 to 135,753
DVUA0099
Position (kb) 132
133
134 Strain fitness (log2 ratio) -2
-1
0
1
2 at 131.377 kb on + strand, within DVUA0097 at 131.401 kb on + strand, within DVUA0097 at 131.409 kb on - strand, within DVUA0097 at 131.411 kb on + strand, within DVUA0097 at 131.459 kb on + strand, within DVUA0097 at 131.499 kb on - strand, within DVUA0097 at 131.507 kb on + strand, within DVUA0097 at 131.560 kb on - strand, within DVUA0097 at 131.590 kb on - strand, within DVUA0097 at 131.666 kb on + strand, within DVUA0097 at 131.666 kb on + strand, within DVUA0097 at 131.669 kb on - strand, within DVUA0097 at 131.694 kb on - strand, within DVUA0097 at 131.720 kb on + strand, within DVUA0097 at 131.733 kb on - strand, within DVUA0097 at 131.733 kb on - strand, within DVUA0097 at 131.777 kb on + strand, within DVUA0097 at 131.785 kb on - strand, within DVUA0097 at 131.802 kb on + strand, within DVUA0097 at 131.809 kb on + strand, within DVUA0097 at 131.810 kb on - strand, within DVUA0097 at 131.810 kb on - strand, within DVUA0097 at 131.924 kb on + strand, within DVUA0097 at 131.968 kb on - strand, within DVUA0097 at 132.061 kb on - strand at 132.095 kb on - strand at 132.104 kb on + strand at 132.243 kb on - strand at 132.243 kb on - strand at 132.289 kb on + strand at 132.325 kb on + strand at 132.325 kb on + strand at 132.371 kb on + strand at 132.433 kb on + strand at 132.441 kb on - strand at 132.472 kb on + strand, within DVUA0098 at 132.473 kb on + strand, within DVUA0098 at 132.605 kb on + strand, within DVUA0098 at 132.605 kb on + strand, within DVUA0098 at 132.728 kb on + strand, within DVUA0098 at 132.751 kb on - strand, within DVUA0098 at 132.775 kb on + strand, within DVUA0098 at 132.783 kb on - strand, within DVUA0098 at 132.796 kb on + strand, within DVUA0098 at 132.799 kb on + strand, within DVUA0098 at 132.898 kb on + strand, within DVUA0098 at 132.908 kb on + strand, within DVUA0098 at 132.916 kb on - strand, within DVUA0098 at 132.941 kb on - strand, within DVUA0098 at 133.073 kb on - strand, within DVUA0098 at 133.104 kb on - strand, within DVUA0098 at 133.104 kb on - strand, within DVUA0098 at 133.193 kb on - strand, within DVUA0098 at 133.198 kb on + strand, within DVUA0098 at 133.198 kb on + strand, within DVUA0098 at 133.252 kb on + strand, within DVUA0098 at 133.252 kb on + strand, within DVUA0098 at 133.284 kb on + strand, within DVUA0098 at 133.395 kb on + strand at 133.395 kb on + strand at 133.410 kb on + strand at 133.474 kb on + strand at 133.474 kb on + strand at 133.482 kb on - strand at 133.664 kb on - strand at 133.666 kb on - strand at 133.711 kb on - strand at 133.800 kb on + strand, within DVUA0099 at 133.806 kb on + strand, within DVUA0099 at 133.822 kb on + strand, within DVUA0099 at 133.829 kb on + strand, within DVUA0099 at 133.876 kb on + strand, within DVUA0099 at 133.975 kb on - strand, within DVUA0099 at 134.053 kb on + strand, within DVUA0099 at 134.093 kb on + strand, within DVUA0099 at 134.098 kb on + strand, within DVUA0099 at 134.215 kb on - strand, within DVUA0099
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with N2 gas (N) with Tungstate 2mM remove 131,377 + DVUA0097 0.45 -0.3 131,401 + DVUA0097 0.46 -0.1 131,409 - DVUA0097 0.47 -0.8 131,411 + DVUA0097 0.47 +0.4 131,459 + DVUA0097 0.50 -0.9 131,499 - DVUA0097 0.53 -1.2 131,507 + DVUA0097 0.53 +0.4 131,560 - DVUA0097 0.57 -0.1 131,590 - DVUA0097 0.59 +0.2 131,666 + DVUA0097 0.64 -0.1 131,666 + DVUA0097 0.64 -0.6 131,669 - DVUA0097 0.64 +0.1 131,694 - DVUA0097 0.66 -0.6 131,720 + DVUA0097 0.68 -0.3 131,733 - DVUA0097 0.68 +0.4 131,733 - DVUA0097 0.68 +0.7 131,777 + DVUA0097 0.71 -0.3 131,785 - DVUA0097 0.72 +0.1 131,802 + DVUA0097 0.73 +1.1 131,809 + DVUA0097 0.73 -0.2 131,810 - DVUA0097 0.74 -0.1 131,810 - DVUA0097 0.74 +0.3 131,924 + DVUA0097 0.81 +0.1 131,968 - DVUA0097 0.84 -0.6 132,061 - -0.4 132,095 - +0.1 132,104 + -0.0 132,243 - -0.1 132,243 - -0.6 132,289 + +1.4 132,325 + +0.1 132,325 + -0.3 132,371 + +0.1 132,433 + -0.2 132,441 - -0.3 132,472 + DVUA0098 0.12 +0.0 132,473 + DVUA0098 0.12 -1.9 132,605 + DVUA0098 0.24 -1.9 132,605 + DVUA0098 0.24 +0.0 132,728 + DVUA0098 0.36 +0.3 132,751 - DVUA0098 0.38 -0.3 132,775 + DVUA0098 0.40 +0.4 132,783 - DVUA0098 0.41 -0.9 132,796 + DVUA0098 0.42 -0.4 132,799 + DVUA0098 0.43 -0.5 132,898 + DVUA0098 0.52 -0.3 132,908 + DVUA0098 0.53 -0.6 132,916 - DVUA0098 0.54 -0.7 132,941 - DVUA0098 0.56 -1.0 133,073 - DVUA0098 0.69 -0.1 133,104 - DVUA0098 0.72 -0.5 133,104 - DVUA0098 0.72 -2.3 133,193 - DVUA0098 0.80 -0.7 133,198 + DVUA0098 0.81 -0.0 133,198 + DVUA0098 0.81 +0.6 133,252 + DVUA0098 0.86 +0.7 133,252 + DVUA0098 0.86 -0.3 133,284 + DVUA0098 0.89 +0.2 133,395 + -0.2 133,395 + -0.9 133,410 + +1.8 133,474 + -0.6 133,474 + -1.0 133,482 - +0.7 133,664 - +0.0 133,666 - -0.3 133,711 - -0.7 133,800 + DVUA0099 0.11 +0.1 133,806 + DVUA0099 0.11 -0.2 133,822 + DVUA0099 0.12 +0.4 133,829 + DVUA0099 0.12 +0.5 133,876 + DVUA0099 0.14 -0.9 133,975 - DVUA0099 0.19 -0.1 134,053 + DVUA0099 0.22 +0.1 134,093 + DVUA0099 0.24 -0.9 134,098 + DVUA0099 0.24 +1.5 134,215 - DVUA0099 0.30 +1.7
Or see this region's nucleotide sequence