Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26515

Experiment: Betaine (C)(N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Betaine (C)(N); with MOPS
5,924,929	+				+0.4
5,924,940	+				+1.0
5,924,940	+				-0.2
5,924,940	+				-0.9
5,924,940	+				-0.7
5,924,941	-				-0.1
5,924,941	-				-1.5
5,924,941	-				-1.4
5,924,941	-				+0.9
5,924,941	-				+0.4
5,924,941	-				+0.2
5,924,942	+				+0.1
5,924,942	+				+0.6
5,924,942	+				-0.8
5,924,942	+				+1.9
5,924,942	+				-0.0
5,924,942	+				-0.5
5,924,942	+				-0.4
5,924,942	+				+1.0
5,924,942	+				-1.9
5,924,942	+				-0.9
5,924,942	+				+0.3
5,924,943	-				+1.0
5,924,943	-				+1.1
5,924,943	-				+0.7
5,924,943	-				-1.0
5,924,943	-				-0.1
5,924,969	+				+0.1
5,925,055	+		PFLU_RS26505	0.34	-1.5
5,925,055	+		PFLU_RS26505	0.34	-0.4
5,925,107	-		PFLU_RS26505	0.59	-0.6
5,925,107	-		PFLU_RS26505	0.59	-0.1
5,925,189	+				+2.2
5,925,189	+				+0.7
5,925,189	+				+1.5
5,925,189	+				+1.6
5,925,189	+				+0.1
5,925,189	+				-0.6
5,925,190	-				+2.3
5,925,190	-				+0.3
5,925,190	-				+1.0
5,925,190	-				-0.4
5,925,190	-				+0.4
5,925,190	-				-0.0
5,925,190	-				-0.7
5,925,190	-				+0.5
5,925,190	-				+1.2
5,925,190	-				-0.9
5,925,190	-				-0.1
5,925,190	-				-1.6
5,925,190	-				+0.1
5,925,190	-				-0.6
5,925,190	-				+0.8
5,925,191	+				-0.3
5,925,191	+				+0.5
5,925,191	+				+1.4
5,925,192	-				+0.4
5,925,192	-				+0.8
5,925,192	-				-0.9
5,925,192	-				-1.8
5,925,192	-				+0.1
5,925,192	-				-0.5
5,925,257	+		PFLU_RS26510	0.11	+0.0
5,925,257	+		PFLU_RS26510	0.11	-0.7
5,925,257	+		PFLU_RS26510	0.11	-0.0
5,925,258	-		PFLU_RS26510	0.11	+1.1
5,925,272	+		PFLU_RS26510	0.13	-0.5
5,925,272	+		PFLU_RS26510	0.13	-0.4
5,925,273	-		PFLU_RS26510	0.13	-0.6
5,925,301	+		PFLU_RS26510	0.18	-0.4
5,925,301	+		PFLU_RS26510	0.18	+0.9
5,925,302	-		PFLU_RS26510	0.18	-0.1
5,925,302	-		PFLU_RS26510	0.18	-2.4
5,925,319	+		PFLU_RS26510	0.21	+0.1
5,925,320	-		PFLU_RS26510	0.21	-0.0
5,925,320	-		PFLU_RS26510	0.21	-1.0
5,925,320	-		PFLU_RS26510	0.21	-0.9
5,925,388	+		PFLU_RS26510	0.31	+0.6
5,925,388	+		PFLU_RS26510	0.31	-0.5
5,925,389	-		PFLU_RS26510	0.32	-1.4
5,925,389	-		PFLU_RS26510	0.32	+0.5
5,925,389	-		PFLU_RS26510	0.32	+2.3
5,925,389	-		PFLU_RS26510	0.32	+0.5
5,925,398	+		PFLU_RS26510	0.33	-1.4
5,925,416	+		PFLU_RS26510	0.36	-0.7
5,925,458	+		PFLU_RS26510	0.42	+1.0
5,925,458	+		PFLU_RS26510	0.42	-0.4
5,925,458	+		PFLU_RS26510	0.42	-0.3
5,925,458	+		PFLU_RS26510	0.42	+0.3
5,925,459	-		PFLU_RS26510	0.43	-1.4
5,925,459	-		PFLU_RS26510	0.43	+1.5
5,925,459	-		PFLU_RS26510	0.43	+0.3
5,925,459	-		PFLU_RS26510	0.43	+0.4
5,925,519	+		PFLU_RS26510	0.52	+0.1
5,925,520	-		PFLU_RS26510	0.52	+0.6
5,925,520	-		PFLU_RS26510	0.52	-2.4
5,925,627	+		PFLU_RS26510	0.69	+0.9
5,925,628	-		PFLU_RS26510	0.69	+1.2
5,925,628	-		PFLU_RS26510	0.69	-0.1
5,925,628	-		PFLU_RS26510	0.69	+0.0
5,925,631	+		PFLU_RS26510	0.70	+1.8
5,925,632	-		PFLU_RS26510	0.70	+0.6
5,925,641	-		PFLU_RS26510	0.71	+0.6
5,925,646	+		PFLU_RS26510	0.72	+0.3
5,925,709	+		PFLU_RS26510	0.82	+0.6
5,925,709	+		PFLU_RS26510	0.82	-0.5
5,925,709	+		PFLU_RS26510	0.82	-0.1
5,925,710	-		PFLU_RS26510	0.82	+0.4
5,925,710	-		PFLU_RS26510	0.82	-0.6
5,925,710	-		PFLU_RS26510	0.82	+0.9
5,925,838	+				-2.1
5,925,838	+				+0.4
5,925,838	+				-0.4
5,925,838	+				+0.5
5,925,838	+				+1.0
5,925,838	+				+0.6
5,925,838	+				-0.2
5,925,838	+				-0.1
5,925,838	+				-0.1
5,925,838	+				-0.0
5,925,838	+				-0.7
5,925,839	-				+0.7
5,925,860	+				+0.1
5,925,860	+				-0.4
5,925,860	+				-2.0
5,925,861	-				+1.1
5,925,861	-				+1.0
5,925,861	-				+0.2
5,925,861	-				-0.6
5,925,861	-				-0.6
5,925,875	+				-0.4
5,925,876	-				-1.7
5,925,876	-				-1.3
5,925,879	+				-0.1
5,925,879	+				-0.9
5,925,879	+				+0.1
5,925,879	+				+0.0
5,925,879	+				+0.8
5,925,879	+				-1.6
5,925,879	+				-2.2
5,925,879	+				+1.9
5,925,880	-				+0.1
5,925,880	-				-0.3
5,925,880	-				-0.2
5,925,880	-				-3.3
5,925,880	-				-0.5
5,925,880	-				+0.2
5,925,880	-				-0.3
5,925,880	-				-1.1
5,925,880	-				-0.4
5,925,880	-				-0.4
5,925,880	-				-0.2
5,925,880	-				+0.7
5,925,948	+				-2.6
5,925,948	+				-2.4
5,925,948	+				-1.7
5,925,948	+				-2.5
5,925,948	+				-2.3
5,925,949	-				-2.9
5,925,949	-				-2.3
5,925,949	-				-2.6
5,925,949	-				-1.3
5,925,949	-				-2.3
5,926,016	+				-2.6
5,926,016	+				-3.6
5,926,016	+				-0.1
5,926,016	+				-2.5
5,926,016	+				-2.4
5,926,016	+				-3.0
5,926,017	-				-2.9
5,926,017	-				-2.3
5,926,017	-				-2.6
5,926,017	-				-2.6
5,926,017	-				-3.4
5,926,017	-				-3.3
5,926,017	-				-2.1
5,926,017	-				-2.6
5,926,206	+		PFLU_RS26515	0.21	-3.3
5,926,206	+		PFLU_RS26515	0.21	+1.3
5,926,207	-		PFLU_RS26515	0.21	-3.1
5,926,207	-		PFLU_RS26515	0.21	-1.4
5,926,207	-		PFLU_RS26515	0.21	-2.7
5,926,217	+		PFLU_RS26515	0.22	-4.2
5,926,217	+		PFLU_RS26515	0.22	-2.9
5,926,217	+		PFLU_RS26515	0.22	-2.9
5,926,217	+		PFLU_RS26515	0.22	-3.6
5,926,218	-		PFLU_RS26515	0.22	+0.3
5,926,218	-		PFLU_RS26515	0.22	-2.3
5,926,218	-		PFLU_RS26515	0.22	-1.1
5,926,218	-		PFLU_RS26515	0.22	-1.8
5,926,218	-		PFLU_RS26515	0.22	-1.5
5,926,218	-		PFLU_RS26515	0.22	-0.7
5,926,335	+		PFLU_RS26515	0.30	-2.9
5,926,379	+		PFLU_RS26515	0.33	-2.6
5,926,379	+		PFLU_RS26515	0.33	-0.4
5,926,379	+		PFLU_RS26515	0.33	-3.4
5,926,379	+		PFLU_RS26515	0.33	-2.0
5,926,379	+		PFLU_RS26515	0.33	-1.1
5,926,379	+		PFLU_RS26515	0.33	-3.3
5,926,379	+		PFLU_RS26515	0.33	-2.6
5,926,379	+		PFLU_RS26515	0.33	-3.6
5,926,379	+		PFLU_RS26515	0.33	+0.0
5,926,379	+		PFLU_RS26515	0.33	-1.1
5,926,380	-		PFLU_RS26515	0.33	-0.9
5,926,380	-		PFLU_RS26515	0.33	-0.6
5,926,380	-		PFLU_RS26515	0.33	-1.3
5,926,380	-		PFLU_RS26515	0.33	-0.7
5,926,380	-		PFLU_RS26515	0.33	-2.4
5,926,380	-		PFLU_RS26515	0.33	-4.0
5,926,380	-		PFLU_RS26515	0.33	-2.6
5,926,380	-		PFLU_RS26515	0.33	-1.5
5,926,380	-		PFLU_RS26515	0.33	-1.6
5,926,380	-		PFLU_RS26515	0.33	-2.3
5,926,380	-		PFLU_RS26515	0.33	-2.3
5,926,380	-		PFLU_RS26515	0.33	-0.4
5,926,380	-		PFLU_RS26515	0.33	-3.4
5,926,393	+		PFLU_RS26515	0.34	-3.4
5,926,393	+		PFLU_RS26515	0.34	-2.3
5,926,393	+		PFLU_RS26515	0.34	-1.1
5,926,394	-		PFLU_RS26515	0.34	-2.0
5,926,394	-		PFLU_RS26515	0.34	-1.4
5,926,394	-		PFLU_RS26515	0.34	-0.7
5,926,394	-		PFLU_RS26515	0.34	-2.2
5,926,397	+		PFLU_RS26515	0.34	-0.9
5,926,397	+		PFLU_RS26515	0.34	-3.0
5,926,398	-		PFLU_RS26515	0.34	-0.7
5,926,398	-		PFLU_RS26515	0.34	-2.0
5,926,398	-		PFLU_RS26515	0.34	-3.0
5,926,398	-		PFLU_RS26515	0.34	-3.0
5,926,398	-		PFLU_RS26515	0.34	-1.6
5,926,398	-		PFLU_RS26515	0.34	-3.1
5,926,398	-		PFLU_RS26515	0.34	-0.9
5,926,398	-		PFLU_RS26515	0.34	-2.4
5,926,562	+		PFLU_RS26515	0.46	-2.5
5,926,563	-		PFLU_RS26515	0.46	-1.1
5,926,672	-		PFLU_RS26515	0.53	-2.2
5,926,727	+		PFLU_RS26515	0.57	-1.9
5,926,727	+		PFLU_RS26515	0.57	-1.3
5,926,727	+		PFLU_RS26515	0.57	-2.6
5,926,727	+		PFLU_RS26515	0.57	-1.5
5,926,728	-		PFLU_RS26515	0.57	-0.5
5,926,728	-		PFLU_RS26515	0.57	-2.6
5,926,728	-		PFLU_RS26515	0.57	-1.6
5,926,728	-		PFLU_RS26515	0.57	-2.2
5,926,728	-		PFLU_RS26515	0.57	-4.2
5,926,728	-		PFLU_RS26515	0.57	-3.8
5,926,728	-		PFLU_RS26515	0.57	-1.3
5,926,736	+		PFLU_RS26515	0.57	-2.9
5,926,736	+		PFLU_RS26515	0.57	-1.7
5,926,736	+		PFLU_RS26515	0.57	-1.6
5,926,736	+		PFLU_RS26515	0.57	-1.6
5,926,736	+		PFLU_RS26515	0.57	-1.2
5,926,736	+		PFLU_RS26515	0.57	-3.2
5,926,736	+		PFLU_RS26515	0.57	-2.1
5,926,736	+		PFLU_RS26515	0.57	-1.4
5,926,736	+		PFLU_RS26515	0.57	-2.8
5,926,736	+		PFLU_RS26515	0.57	-3.1
5,926,736	+		PFLU_RS26515	0.57	-3.2
5,926,736	+		PFLU_RS26515	0.57	-2.0
5,926,736	+		PFLU_RS26515	0.57	-3.2
5,926,736	+		PFLU_RS26515	0.57	-1.6
5,926,737	-		PFLU_RS26515	0.58	-2.1
5,926,737	-		PFLU_RS26515	0.58	-2.1
5,926,737	-		PFLU_RS26515	0.58	-3.4
5,926,737	-		PFLU_RS26515	0.58	-1.8
5,926,737	-		PFLU_RS26515	0.58	-0.4
5,926,737	-		PFLU_RS26515	0.58	-1.7
5,926,737	-		PFLU_RS26515	0.58	-2.2
5,926,737	-		PFLU_RS26515	0.58	-2.3
5,926,737	-		PFLU_RS26515	0.58	-3.5
5,926,737	-		PFLU_RS26515	0.58	-1.6
5,926,737	-		PFLU_RS26515	0.58	-2.3
5,926,737	-		PFLU_RS26515	0.58	-3.7
5,926,737	-		PFLU_RS26515	0.58	-2.1
5,926,737	-		PFLU_RS26515	0.58	-0.7
5,926,737	-		PFLU_RS26515	0.58	-1.9
5,926,737	-		PFLU_RS26515	0.58	-3.8
5,926,737	-		PFLU_RS26515	0.58	-1.6
5,926,762	+		PFLU_RS26515	0.59	-1.8
5,926,762	+		PFLU_RS26515	0.59	-2.6
5,926,762	+		PFLU_RS26515	0.59	-2.2
5,926,762	+		PFLU_RS26515	0.59	-1.5
5,926,762	+		PFLU_RS26515	0.59	-2.5
5,926,762	+		PFLU_RS26515	0.59	-1.4
5,926,762	+		PFLU_RS26515	0.59	-0.7
5,926,762	+		PFLU_RS26515	0.59	-2.5
5,926,762	+		PFLU_RS26515	0.59	-1.1
5,926,762	+		PFLU_RS26515	0.59	-2.6
5,926,762	+		PFLU_RS26515	0.59	-1.1
5,926,762	+		PFLU_RS26515	0.59	-1.9
5,926,762	+		PFLU_RS26515	0.59	-0.9
5,926,762	+		PFLU_RS26515	0.59	-1.3
5,926,762	+		PFLU_RS26515	0.59	-0.3
5,926,762	+		PFLU_RS26515	0.59	+0.7
5,926,762	+		PFLU_RS26515	0.59	-2.6
5,926,762	+		PFLU_RS26515	0.59	-2.6
5,926,762	+		PFLU_RS26515	0.59	-1.6
5,926,762	+		PFLU_RS26515	0.59	-2.8
5,926,762	+		PFLU_RS26515	0.59	+0.3
5,926,762	+		PFLU_RS26515	0.59	-1.8
5,926,762	+		PFLU_RS26515	0.59	-2.8
5,926,762	+		PFLU_RS26515	0.59	-2.1
5,926,762	+		PFLU_RS26515	0.59	-2.0
5,926,762	+		PFLU_RS26515	0.59	-1.5
5,926,763	-		PFLU_RS26515	0.59	-1.2
5,926,763	-		PFLU_RS26515	0.59	-2.4
5,926,763	-		PFLU_RS26515	0.59	-3.4
5,926,763	-		PFLU_RS26515	0.59	-3.4
5,926,763	-		PFLU_RS26515	0.59	-2.2
5,926,763	-		PFLU_RS26515	0.59	-2.8
5,926,763	-		PFLU_RS26515	0.59	-2.5
5,926,763	-		PFLU_RS26515	0.59	-2.3
5,926,763	-		PFLU_RS26515	0.59	-1.7
5,926,763	-		PFLU_RS26515	0.59	-2.5
5,926,763	-		PFLU_RS26515	0.59	-3.4
5,926,763	-		PFLU_RS26515	0.59	+2.9
5,926,763	-		PFLU_RS26515	0.59	-2.5
5,926,763	-		PFLU_RS26515	0.59	-3.0
5,926,763	-		PFLU_RS26515	0.59	-3.4
5,926,763	-		PFLU_RS26515	0.59	-3.5
5,926,763	-		PFLU_RS26515	0.59	-2.5
5,926,763	-		PFLU_RS26515	0.59	-2.5
5,926,787	+		PFLU_RS26515	0.61	-1.1
5,926,787	+		PFLU_RS26515	0.61	-1.1
5,926,787	+		PFLU_RS26515	0.61	-1.7
5,926,787	+		PFLU_RS26515	0.61	+0.6
5,926,788	-		PFLU_RS26515	0.61	-1.8
5,926,788	-		PFLU_RS26515	0.61	+0.1
5,926,788	-		PFLU_RS26515	0.61	-2.9
5,926,788	-		PFLU_RS26515	0.61	-3.4
5,926,788	-		PFLU_RS26515	0.61	+0.9
5,926,788	-		PFLU_RS26515	0.61	-0.1
5,926,788	-		PFLU_RS26515	0.61	+0.3
5,926,788	-		PFLU_RS26515	0.61	-2.4
5,926,788	-		PFLU_RS26515	0.61	-0.8
5,926,788	-		PFLU_RS26515	0.61	-0.6
5,926,871	+		PFLU_RS26515	0.67	-2.4
5,926,871	+		PFLU_RS26515	0.67	-2.4
5,926,871	+		PFLU_RS26515	0.67	-1.1
5,926,871	+		PFLU_RS26515	0.67	-2.4
5,926,872	-		PFLU_RS26515	0.67	-1.4
5,926,872	-		PFLU_RS26515	0.67	-2.1
5,926,988	+		PFLU_RS26515	0.75	-2.3
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5,927,252	+				-0.8
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