Experiment: MoYLS4 with furfural 0.0625%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2837 and DVU2838 are separated by 71 nucleotides DVU2838 and DVU2839 are separated by 0 nucleotides DVU2839 and DVU2840 are separated by 108 nucleotides
DVU2837: DVU2837 - conserved hypothetical protein (TIGR), at 2,941,168 to 2,942,241
DVU2837
DVU2838: DVU2838 - conserved hypothetical protein (TIGR), at 2,942,313 to 2,943,650
DVU2838
DVU2839: DVU2839 - conserved hypothetical protein (TIGR), at 2,943,651 to 2,944,175
DVU2839
DVU2840: DVU2840 - conserved hypothetical protein (TIGR), at 2,944,284 to 2,944,985
DVU2840
Position (kb)
2942
2943
2944 Strain fitness (log2 ratio)
-1
0
1
2 at 2941.357 kb on + strand, within DVU2837 at 2941.418 kb on + strand, within DVU2837 at 2941.542 kb on + strand, within DVU2837 at 2941.550 kb on - strand, within DVU2837 at 2941.550 kb on - strand, within DVU2837 at 2941.550 kb on - strand, within DVU2837 at 2941.615 kb on - strand, within DVU2837 at 2941.615 kb on - strand, within DVU2837 at 2941.656 kb on + strand, within DVU2837 at 2941.704 kb on + strand, within DVU2837 at 2941.767 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.776 kb on + strand, within DVU2837 at 2941.784 kb on - strand, within DVU2837 at 2941.784 kb on - strand, within DVU2837 at 2941.810 kb on - strand, within DVU2837 at 2941.820 kb on - strand, within DVU2837 at 2941.831 kb on - strand, within DVU2837 at 2941.892 kb on - strand, within DVU2837 at 2941.892 kb on - strand, within DVU2837 at 2941.923 kb on + strand, within DVU2837 at 2941.923 kb on + strand, within DVU2837 at 2942.084 kb on - strand, within DVU2837 at 2942.414 kb on - strand at 2942.929 kb on + strand, within DVU2838 at 2943.142 kb on + strand, within DVU2838 at 2943.218 kb on + strand, within DVU2838 at 2943.218 kb on + strand, within DVU2838 at 2943.226 kb on - strand, within DVU2838 at 2943.278 kb on + strand, within DVU2838 at 2943.286 kb on - strand, within DVU2838 at 2943.307 kb on + strand, within DVU2838 at 2943.529 kb on - strand at 2943.595 kb on - strand at 2943.709 kb on + strand, within DVU2839 at 2943.988 kb on + strand, within DVU2839 at 2944.091 kb on + strand, within DVU2839 at 2944.112 kb on + strand, within DVU2839
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with furfural 0.0625% remove 2,941,357 + DVU2837 0.18 +0.5 2,941,418 + DVU2837 0.23 +0.9 2,941,542 + DVU2837 0.35 +0.8 2,941,550 - DVU2837 0.36 -0.5 2,941,550 - DVU2837 0.36 -0.4 2,941,550 - DVU2837 0.36 +0.3 2,941,615 - DVU2837 0.42 -0.7 2,941,615 - DVU2837 0.42 -0.1 2,941,656 + DVU2837 0.45 -0.1 2,941,704 + DVU2837 0.50 -1.6 2,941,767 + DVU2837 0.56 +0.1 2,941,776 + DVU2837 0.57 -0.4 2,941,776 + DVU2837 0.57 -1.4 2,941,776 + DVU2837 0.57 -0.6 2,941,776 + DVU2837 0.57 -0.6 2,941,784 - DVU2837 0.57 -0.0 2,941,784 - DVU2837 0.57 +0.1 2,941,810 - DVU2837 0.60 +0.3 2,941,820 - DVU2837 0.61 -0.6 2,941,831 - DVU2837 0.62 +0.0 2,941,892 - DVU2837 0.67 -0.5 2,941,892 - DVU2837 0.67 -0.7 2,941,923 + DVU2837 0.70 +0.1 2,941,923 + DVU2837 0.70 -0.5 2,942,084 - DVU2837 0.85 -1.1 2,942,414 - +2.1 2,942,929 + DVU2838 0.46 -0.7 2,943,142 + DVU2838 0.62 -1.2 2,943,218 + DVU2838 0.68 +0.1 2,943,218 + DVU2838 0.68 -0.2 2,943,226 - DVU2838 0.68 -0.5 2,943,278 + DVU2838 0.72 -0.3 2,943,286 - DVU2838 0.73 -0.2 2,943,307 + DVU2838 0.74 -1.1 2,943,529 - -0.5 2,943,595 - +0.3 2,943,709 + DVU2839 0.11 -0.1 2,943,988 + DVU2839 0.64 -1.3 2,944,091 + DVU2839 0.84 -0.5 2,944,112 + DVU2839 0.88 +0.2
Or see this region's nucleotide sequence