Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2673

Experiment: MoYLS4 with furfural 0.0625%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with furfural 0.0625%
2,783,598	+		DVU2672	0.34	-0.8
2,783,631	+		DVU2672	0.40	-0.4
2,783,644	+		DVU2672	0.42	-0.0
2,783,652	-		DVU2672	0.43	-0.2
2,783,652	-		DVU2672	0.43	-0.2
2,783,684	-		DVU2672	0.48	-0.3
2,783,684	-		DVU2672	0.48	+0.1
2,783,693	+		DVU2672	0.50	-0.0
2,783,732	-		DVU2672	0.56	-0.4
2,783,766	-		DVU2672	0.61	-0.5
2,783,784	+		DVU2672	0.64	+0.1
2,783,828	+		DVU2672	0.71	+0.1
2,783,887	+		DVU2672	0.81	+0.2
2,783,890	-		DVU2672	0.81	-0.7
2,783,898	+		DVU2672	0.82	-0.3
2,783,960	-				-0.3
2,784,014	-				-0.0
2,784,215	-				+0.3
2,784,224	-				+0.5
2,784,255	-				+0.8
2,784,257	-				-0.1
2,784,395	-				-0.2
2,784,431	-				-1.2
2,784,554	+				+0.3
2,784,649	+				+1.7
2,784,657	-				+0.0
2,784,717	+	glpA	DVU2673	0.13	+1.0
2,784,833	-	glpA	DVU2673	0.23	-0.3
2,784,924	+	glpA	DVU2673	0.31	-0.7
2,784,932	-	glpA	DVU2673	0.32	-0.3
2,785,037	+	glpA	DVU2673	0.41	-0.1
2,785,078	-	glpA	DVU2673	0.44	-1.6
2,785,121	-	glpA	DVU2673	0.48	-2.0
2,785,186	-	glpA	DVU2673	0.53	-1.4
2,785,257	+	glpA	DVU2673	0.59	-0.1
2,785,279	-	glpA	DVU2673	0.61	+1.7
2,785,337	-	glpA	DVU2673	0.66	-0.3
2,785,365	+	glpA	DVU2673	0.69	-1.1
2,785,373	-	glpA	DVU2673	0.69	-0.9
2,785,373	-	glpA	DVU2673	0.69	+0.1
2,785,373	-	glpA	DVU2673	0.69	-1.0
2,785,402	+	glpA	DVU2673	0.72	+1.1
2,785,409	+	glpA	DVU2673	0.72	-1.3
2,785,417	-	glpA	DVU2673	0.73	-0.9
2,785,430	+	glpA	DVU2673	0.74	-0.3
2,785,430	+	glpA	DVU2673	0.74	-0.8
2,785,438	-	glpA	DVU2673	0.75	-0.4
2,785,449	+	glpA	DVU2673	0.76	+1.1
2,785,471	-	glpA	DVU2673	0.78	+0.4
2,785,547	-	glpA	DVU2673	0.84	-0.7
2,785,597	+	glpA	DVU2673	0.88	-0.0
2,785,605	-	glpA	DVU2673	0.89	-0.3
2,785,673	+				+2.1
2,785,686	+				-0.7
2,785,707	-				+0.4
2,785,754	+				-1.6
2,786,026	+	sdhB	DVU2674	0.41	-0.8
2,786,032	-	sdhB	DVU2674	0.41	-0.2
2,786,050	+	sdhB	DVU2674	0.44	-0.2
2,786,199	+	sdhB	DVU2674	0.65	+0.5
2,786,207	-	sdhB	DVU2674	0.66	+1.0
2,786,304	-	sdhB	DVU2674	0.79	-0.1
2,786,338	+	sdhB	DVU2674	0.84	+0.6
2,786,341	+	sdhB	DVU2674	0.84	+0.5
2,786,364	+	sdhB	DVU2674	0.88	+0.2
2,786,375	+	sdhB	DVU2674	0.89	+0.1
2,786,384	-				-0.3
2,786,429	-				+0.3
2,786,453	+				+0.2
2,786,495	-				-0.1
2,786,561	-				+0.0
2,786,608	+				-0.1
2,786,691	+				+1.6