Experiment: MoYLS4 with Cobalt Chloride 20uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0059 and DVUA0060 are separated by 138 nucleotides DVUA0060 and DVUA0061 overlap by 4 nucleotides
DVUA0059: DVUA0059 - conserved hypothetical protein (TIGR), at 72,938 to 74,314
DVUA0059
DVUA0060: DVUA0060 - membrane protein, putative (TIGR), at 74,453 to 75,838
DVUA0060
DVUA0061: DVUA0061 - membrane protein, putative (TIGR), at 75,835 to 77,187
DVUA0061
Position (kb)
74
75
76 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 73.467 kb on + strand, within DVUA0059 at 73.510 kb on - strand, within DVUA0059 at 73.535 kb on + strand, within DVUA0059 at 73.548 kb on - strand, within DVUA0059 at 73.679 kb on + strand, within DVUA0059 at 73.680 kb on - strand, within DVUA0059 at 73.680 kb on - strand, within DVUA0059 at 73.689 kb on + strand, within DVUA0059 at 73.689 kb on + strand, within DVUA0059 at 73.692 kb on - strand, within DVUA0059 at 73.697 kb on - strand, within DVUA0059 at 73.697 kb on - strand, within DVUA0059 at 73.699 kb on + strand, within DVUA0059 at 73.851 kb on + strand, within DVUA0059 at 73.864 kb on - strand, within DVUA0059 at 73.891 kb on - strand, within DVUA0059 at 73.911 kb on + strand, within DVUA0059 at 73.965 kb on - strand, within DVUA0059 at 74.167 kb on + strand, within DVUA0059 at 74.175 kb on - strand, within DVUA0059 at 74.232 kb on - strand at 74.284 kb on - strand at 74.321 kb on - strand at 74.372 kb on - strand at 74.418 kb on + strand at 74.586 kb on + strand at 74.596 kb on + strand, within DVUA0060 at 74.615 kb on + strand, within DVUA0060 at 74.682 kb on - strand, within DVUA0060 at 74.682 kb on - strand, within DVUA0060 at 74.701 kb on + strand, within DVUA0060 at 74.701 kb on + strand, within DVUA0060 at 74.759 kb on + strand, within DVUA0060 at 74.759 kb on + strand, within DVUA0060 at 74.759 kb on + strand, within DVUA0060 at 74.767 kb on - strand, within DVUA0060 at 74.767 kb on - strand, within DVUA0060 at 74.774 kb on + strand, within DVUA0060 at 74.825 kb on - strand, within DVUA0060 at 74.877 kb on - strand, within DVUA0060 at 74.898 kb on + strand, within DVUA0060 at 74.917 kb on + strand, within DVUA0060 at 74.934 kb on - strand, within DVUA0060 at 74.980 kb on - strand, within DVUA0060 at 75.017 kb on - strand, within DVUA0060 at 75.195 kb on - strand, within DVUA0060 at 75.217 kb on + strand, within DVUA0060 at 75.217 kb on + strand, within DVUA0060 at 75.225 kb on - strand, within DVUA0060 at 75.225 kb on - strand, within DVUA0060 at 75.225 kb on - strand, within DVUA0060 at 75.263 kb on + strand, within DVUA0060 at 75.301 kb on + strand, within DVUA0060 at 75.325 kb on - strand, within DVUA0060 at 75.504 kb on - strand, within DVUA0060 at 75.606 kb on + strand, within DVUA0060 at 75.630 kb on + strand, within DVUA0060 at 75.700 kb on + strand at 75.764 kb on + strand at 75.840 kb on - strand at 75.841 kb on - strand at 75.846 kb on + strand at 75.847 kb on + strand at 75.918 kb on + strand at 75.954 kb on + strand at 75.962 kb on - strand at 76.018 kb on - strand, within DVUA0061 at 76.059 kb on - strand, within DVUA0061 at 76.115 kb on + strand, within DVUA0061 at 76.275 kb on - strand, within DVUA0061 at 76.295 kb on + strand, within DVUA0061 at 76.318 kb on - strand, within DVUA0061 at 76.322 kb on + strand, within DVUA0061 at 76.382 kb on - strand, within DVUA0061 at 76.423 kb on - strand, within DVUA0061 at 76.458 kb on - strand, within DVUA0061 at 76.554 kb on + strand, within DVUA0061 at 76.597 kb on - strand, within DVUA0061 at 76.607 kb on - strand, within DVUA0061 at 76.637 kb on + strand, within DVUA0061 at 76.637 kb on + strand, within DVUA0061 at 76.645 kb on - strand, within DVUA0061 at 76.661 kb on + strand, within DVUA0061 at 76.661 kb on + strand, within DVUA0061 at 76.661 kb on + strand, within DVUA0061 at 76.732 kb on + strand, within DVUA0061 at 76.740 kb on - strand, within DVUA0061 at 76.740 kb on - strand, within DVUA0061 at 76.740 kb on - strand, within DVUA0061 at 76.745 kb on - strand, within DVUA0061
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Cobalt Chloride 20uM remove 73,467 + DVUA0059 0.38 -1.0 73,510 - DVUA0059 0.42 -0.9 73,535 + DVUA0059 0.43 -0.3 73,548 - DVUA0059 0.44 -0.9 73,679 + DVUA0059 0.54 -0.9 73,680 - DVUA0059 0.54 +0.1 73,680 - DVUA0059 0.54 -0.3 73,689 + DVUA0059 0.55 -0.3 73,689 + DVUA0059 0.55 -0.6 73,692 - DVUA0059 0.55 +2.1 73,697 - DVUA0059 0.55 -0.5 73,697 - DVUA0059 0.55 +1.9 73,699 + DVUA0059 0.55 -0.2 73,851 + DVUA0059 0.66 -0.2 73,864 - DVUA0059 0.67 -0.7 73,891 - DVUA0059 0.69 -0.2 73,911 + DVUA0059 0.71 +0.9 73,965 - DVUA0059 0.75 +0.1 74,167 + DVUA0059 0.89 -0.8 74,175 - DVUA0059 0.90 -0.2 74,232 - +0.4 74,284 - +0.2 74,321 - +1.7 74,372 - -0.1 74,418 + +0.1 74,586 + -0.3 74,596 + DVUA0060 0.10 -0.2 74,615 + DVUA0060 0.12 +0.6 74,682 - DVUA0060 0.17 -0.2 74,682 - DVUA0060 0.17 -1.2 74,701 + DVUA0060 0.18 +0.7 74,701 + DVUA0060 0.18 +0.0 74,759 + DVUA0060 0.22 +0.7 74,759 + DVUA0060 0.22 +0.9 74,759 + DVUA0060 0.22 -0.1 74,767 - DVUA0060 0.23 +0.4 74,767 - DVUA0060 0.23 -0.4 74,774 + DVUA0060 0.23 +0.5 74,825 - DVUA0060 0.27 -0.7 74,877 - DVUA0060 0.31 -0.8 74,898 + DVUA0060 0.32 -0.4 74,917 + DVUA0060 0.33 +0.4 74,934 - DVUA0060 0.35 +1.4 74,980 - DVUA0060 0.38 +1.3 75,017 - DVUA0060 0.41 +0.6 75,195 - DVUA0060 0.54 -0.6 75,217 + DVUA0060 0.55 -0.2 75,217 + DVUA0060 0.55 +0.7 75,225 - DVUA0060 0.56 +0.9 75,225 - DVUA0060 0.56 -0.0 75,225 - DVUA0060 0.56 +0.4 75,263 + DVUA0060 0.58 -0.2 75,301 + DVUA0060 0.61 -0.1 75,325 - DVUA0060 0.63 -0.5 75,504 - DVUA0060 0.76 -0.1 75,606 + DVUA0060 0.83 +0.2 75,630 + DVUA0060 0.85 -0.3 75,700 + -0.6 75,764 + +0.1 75,840 - -0.1 75,841 - -0.3 75,846 + -1.3 75,847 + +0.1 75,918 + -0.3 75,954 + -1.9 75,962 - +1.6 76,018 - DVUA0061 0.14 +0.1 76,059 - DVUA0061 0.17 -0.2 76,115 + DVUA0061 0.21 -0.3 76,275 - DVUA0061 0.33 -0.8 76,295 + DVUA0061 0.34 -0.3 76,318 - DVUA0061 0.36 -0.2 76,322 + DVUA0061 0.36 -0.5 76,382 - DVUA0061 0.40 +0.6 76,423 - DVUA0061 0.43 -0.0 76,458 - DVUA0061 0.46 +1.2 76,554 + DVUA0061 0.53 -0.1 76,597 - DVUA0061 0.56 +0.9 76,607 - DVUA0061 0.57 -0.2 76,637 + DVUA0061 0.59 -0.3 76,637 + DVUA0061 0.59 -1.5 76,645 - DVUA0061 0.60 -0.4 76,661 + DVUA0061 0.61 +0.0 76,661 + DVUA0061 0.61 +1.9 76,661 + DVUA0061 0.61 +1.3 76,732 + DVUA0061 0.66 -0.6 76,740 - DVUA0061 0.67 +0.1 76,740 - DVUA0061 0.67 -0.3 76,740 - DVUA0061 0.67 -0.5 76,745 - DVUA0061 0.67 -0.5
Or see this region's nucleotide sequence