Experiment: MoLS4 with L-Cysteine 5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1784 and DVU1785 are separated by 203 nucleotides DVU1785 and DVU1786 are separated by 559 nucleotides
DVU1784: DVU1784 - oxidoreductase, short-chain dehydrogenase/reductase family (TIGR), at 1,846,930 to 1,847,691
DVU1784
DVU1785: DVU1785 - membrane protein, MarC family (TIGR), at 1,847,895 to 1,848,497
DVU1785
DVU1786: DVU1786 - GGDEF domain protein (TIGR), at 1,849,057 to 1,850,115
DVU1786
Position (kb)
1847
1848
1849 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1846.914 kb on + strand at 1846.929 kb on - strand at 1846.930 kb on + strand at 1846.938 kb on - strand at 1847.079 kb on - strand, within DVU1784 at 1847.099 kb on - strand, within DVU1784 at 1847.109 kb on + strand, within DVU1784 at 1847.142 kb on + strand, within DVU1784 at 1847.256 kb on + strand, within DVU1784 at 1847.276 kb on + strand, within DVU1784 at 1847.394 kb on - strand, within DVU1784 at 1847.428 kb on + strand, within DVU1784 at 1847.433 kb on + strand, within DVU1784 at 1847.543 kb on - strand, within DVU1784 at 1847.657 kb on - strand at 1847.722 kb on + strand at 1847.807 kb on + strand at 1847.959 kb on + strand, within DVU1785 at 1847.990 kb on - strand, within DVU1785 at 1848.130 kb on + strand, within DVU1785 at 1848.164 kb on - strand, within DVU1785 at 1848.220 kb on - strand, within DVU1785 at 1848.300 kb on + strand, within DVU1785 at 1848.368 kb on - strand, within DVU1785 at 1848.426 kb on - strand, within DVU1785 at 1848.475 kb on - strand at 1848.505 kb on - strand at 1848.553 kb on - strand at 1848.654 kb on + strand at 1848.662 kb on - strand at 1848.671 kb on + strand at 1848.679 kb on - strand at 1848.749 kb on + strand at 1848.757 kb on - strand at 1848.800 kb on + strand at 1848.826 kb on + strand at 1848.907 kb on - strand at 1849.137 kb on + strand at 1849.172 kb on - strand, within DVU1786 at 1849.205 kb on + strand, within DVU1786 at 1849.205 kb on + strand, within DVU1786 at 1849.259 kb on + strand, within DVU1786 at 1849.304 kb on - strand, within DVU1786 at 1849.408 kb on + strand, within DVU1786 at 1849.427 kb on + strand, within DVU1786
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 5mM as nutrient remove 1,846,914 + -0.1 1,846,929 - +1.1 1,846,930 + -0.3 1,846,938 - -0.1 1,847,079 - DVU1784 0.20 -0.9 1,847,099 - DVU1784 0.22 -0.7 1,847,109 + DVU1784 0.23 -1.3 1,847,142 + DVU1784 0.28 +0.7 1,847,256 + DVU1784 0.43 -0.3 1,847,276 + DVU1784 0.45 -0.3 1,847,394 - DVU1784 0.61 -2.1 1,847,428 + DVU1784 0.65 -0.1 1,847,433 + DVU1784 0.66 -0.1 1,847,543 - DVU1784 0.80 -3.8 1,847,657 - +0.8 1,847,722 + -0.2 1,847,807 + -1.7 1,847,959 + DVU1785 0.11 -1.9 1,847,990 - DVU1785 0.16 -0.7 1,848,130 + DVU1785 0.39 +0.7 1,848,164 - DVU1785 0.45 -2.0 1,848,220 - DVU1785 0.54 -1.8 1,848,300 + DVU1785 0.67 -1.4 1,848,368 - DVU1785 0.78 -1.1 1,848,426 - DVU1785 0.88 +0.3 1,848,475 - -0.3 1,848,505 - +1.2 1,848,553 - -1.2 1,848,654 + +0.7 1,848,662 - -0.2 1,848,671 + -0.8 1,848,679 - -0.6 1,848,749 + -0.5 1,848,757 - +0.2 1,848,800 + -0.4 1,848,826 + +0.2 1,848,907 - +0.2 1,849,137 + -0.3 1,849,172 - DVU1786 0.11 -0.3 1,849,205 + DVU1786 0.14 -0.0 1,849,205 + DVU1786 0.14 -1.5 1,849,259 + DVU1786 0.19 -1.1 1,849,304 - DVU1786 0.23 +0.4 1,849,408 + DVU1786 0.33 -0.7 1,849,427 + DVU1786 0.35 -1.2
Or see this region's nucleotide sequence