Experiment: MoLS4 with L-Cysteine 5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1432 and DVU1434 are separated by 235 nucleotides DVU1434 and DVU1435 are separated by 62 nucleotides
DVU1432: DVU1432 - radical SAM domain protein (TIGR), at 1,510,471 to 1,513,065
DVU1432
DVU1434: DVU1434 - hypothetical protein (TIGR), at 1,513,301 to 1,513,666
DVU1434
DVU1435: DVU1435 - membrane protein, putative (TIGR), at 1,513,729 to 1,514,913
DVU1435
Position (kb)
1513
1514 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1512.489 kb on - strand, within DVU1432 at 1512.537 kb on - strand, within DVU1432 at 1512.678 kb on + strand, within DVU1432 at 1512.683 kb on + strand, within DVU1432 at 1512.683 kb on + strand, within DVU1432 at 1512.686 kb on - strand, within DVU1432 at 1512.696 kb on - strand, within DVU1432 at 1512.872 kb on + strand at 1512.872 kb on + strand at 1512.880 kb on - strand at 1512.968 kb on + strand at 1513.001 kb on + strand at 1513.137 kb on - strand at 1513.512 kb on - strand, within DVU1434 at 1513.570 kb on - strand, within DVU1434 at 1513.659 kb on - strand at 1513.676 kb on + strand at 1513.768 kb on + strand at 1513.768 kb on + strand at 1513.776 kb on - strand at 1513.776 kb on - strand at 1513.776 kb on - strand at 1513.776 kb on - strand at 1513.946 kb on + strand, within DVU1435 at 1513.946 kb on + strand, within DVU1435 at 1513.954 kb on - strand, within DVU1435 at 1513.954 kb on - strand, within DVU1435 at 1513.984 kb on + strand, within DVU1435 at 1513.984 kb on + strand, within DVU1435 at 1513.985 kb on + strand, within DVU1435 at 1513.992 kb on - strand, within DVU1435 at 1514.018 kb on + strand, within DVU1435 at 1514.051 kb on - strand, within DVU1435 at 1514.095 kb on - strand, within DVU1435 at 1514.275 kb on + strand, within DVU1435 at 1514.285 kb on - strand, within DVU1435 at 1514.287 kb on + strand, within DVU1435 at 1514.295 kb on - strand, within DVU1435 at 1514.355 kb on + strand, within DVU1435 at 1514.366 kb on + strand, within DVU1435 at 1514.366 kb on + strand, within DVU1435 at 1514.366 kb on + strand, within DVU1435 at 1514.376 kb on + strand, within DVU1435 at 1514.425 kb on - strand, within DVU1435 at 1514.498 kb on + strand, within DVU1435 at 1514.543 kb on - strand, within DVU1435 at 1514.560 kb on - strand, within DVU1435 at 1514.652 kb on + strand, within DVU1435 at 1514.652 kb on + strand, within DVU1435 at 1514.653 kb on + strand, within DVU1435
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 5mM as nutrient remove 1,512,489 - DVU1432 0.78 -1.7 1,512,537 - DVU1432 0.80 -0.6 1,512,678 + DVU1432 0.85 -1.1 1,512,683 + DVU1432 0.85 +2.2 1,512,683 + DVU1432 0.85 -0.7 1,512,686 - DVU1432 0.85 +1.4 1,512,696 - DVU1432 0.86 +0.3 1,512,872 + -1.8 1,512,872 + -0.6 1,512,880 - -0.1 1,512,968 + -1.5 1,513,001 + +0.1 1,513,137 - -0.4 1,513,512 - DVU1434 0.58 -1.3 1,513,570 - DVU1434 0.73 -1.4 1,513,659 - -0.8 1,513,676 + -0.5 1,513,768 + +0.2 1,513,768 + -0.0 1,513,776 - -0.5 1,513,776 - +0.2 1,513,776 - +0.2 1,513,776 - -0.7 1,513,946 + DVU1435 0.18 -0.0 1,513,946 + DVU1435 0.18 -0.1 1,513,954 - DVU1435 0.19 -0.4 1,513,954 - DVU1435 0.19 +0.5 1,513,984 + DVU1435 0.22 +0.4 1,513,984 + DVU1435 0.22 +0.4 1,513,985 + DVU1435 0.22 +1.2 1,513,992 - DVU1435 0.22 +0.4 1,514,018 + DVU1435 0.24 -0.7 1,514,051 - DVU1435 0.27 -1.3 1,514,095 - DVU1435 0.31 -1.0 1,514,275 + DVU1435 0.46 -1.0 1,514,285 - DVU1435 0.47 +0.2 1,514,287 + DVU1435 0.47 -0.5 1,514,295 - DVU1435 0.48 -1.7 1,514,355 + DVU1435 0.53 +0.3 1,514,366 + DVU1435 0.54 +0.3 1,514,366 + DVU1435 0.54 +0.1 1,514,366 + DVU1435 0.54 -0.0 1,514,376 + DVU1435 0.55 +0.1 1,514,425 - DVU1435 0.59 +0.2 1,514,498 + DVU1435 0.65 -0.5 1,514,543 - DVU1435 0.69 +0.4 1,514,560 - DVU1435 0.70 +0.2 1,514,652 + DVU1435 0.78 +0.4 1,514,652 + DVU1435 0.78 -0.6 1,514,653 + DVU1435 0.78 -0.4
Or see this region's nucleotide sequence