Experiment: MoLS4 with L-Cysteine 5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0214 and DVU0215 are separated by 122 nucleotides DVU0215 and DVU0216 are separated by 1 nucleotides DVU0216 and DVU0217 are separated by 1 nucleotides
DVU0214: DVU0214 - tail/DNA circulation protein, putative (TIGR), at 254,468 to 255,667
DVU0214
DVU0215: DVU0215 - tail protein, putative (TIGR), at 255,790 to 256,923
DVU0215
DVU0216: DVU0216 - phage baseplate assembly protein V, putative (TIGR), at 256,925 to 257,563
DVU0216
DVU0217: DVU0217 - tail protein, putative (TIGR), at 257,565 to 258,041
DVU0217
Position (kb) 255
256
257 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 255.244 kb on + strand, within DVU0214 at 255.249 kb on + strand, within DVU0214 at 255.268 kb on - strand, within DVU0214 at 255.563 kb on - strand at 255.932 kb on - strand, within DVU0215 at 256.100 kb on + strand, within DVU0215 at 256.105 kb on + strand, within DVU0215 at 256.167 kb on - strand, within DVU0215 at 256.173 kb on - strand, within DVU0215 at 256.180 kb on - strand, within DVU0215 at 256.287 kb on + strand, within DVU0215 at 256.337 kb on + strand, within DVU0215 at 256.376 kb on - strand, within DVU0215 at 256.851 kb on + strand at 256.871 kb on - strand at 257.185 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.236 kb on - strand, within DVU0216 at 257.357 kb on + strand, within DVU0216 at 257.374 kb on - strand, within DVU0216 at 257.386 kb on + strand, within DVU0216 at 257.411 kb on - strand, within DVU0216 at 257.605 kb on + strand at 257.663 kb on - strand, within DVU0217 at 257.668 kb on - strand, within DVU0217 at 257.673 kb on - strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.906 kb on - strand, within DVU0217 at 257.913 kb on - strand, within DVU0217
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 5mM as nutrient remove 255,244 + DVU0214 0.65 -0.0 255,249 + DVU0214 0.65 +0.4 255,268 - DVU0214 0.67 -0.2 255,563 - +0.1 255,932 - DVU0215 0.13 +0.8 256,100 + DVU0215 0.27 +0.5 256,105 + DVU0215 0.28 +0.2 256,167 - DVU0215 0.33 +0.9 256,173 - DVU0215 0.34 +0.3 256,180 - DVU0215 0.34 +0.1 256,287 + DVU0215 0.44 -0.2 256,337 + DVU0215 0.48 +0.1 256,376 - DVU0215 0.52 +0.7 256,851 + -0.0 256,871 - -0.7 257,185 + DVU0216 0.41 +1.2 257,230 + DVU0216 0.48 -3.6 257,230 + DVU0216 0.48 -1.5 257,236 - DVU0216 0.49 +0.3 257,357 + DVU0216 0.68 -1.0 257,374 - DVU0216 0.70 -0.4 257,386 + DVU0216 0.72 -0.8 257,411 - DVU0216 0.76 -0.6 257,605 + +0.2 257,663 - DVU0217 0.21 -1.1 257,668 - DVU0217 0.22 -1.2 257,673 - DVU0217 0.23 -1.6 257,905 + DVU0217 0.71 +0.2 257,905 + DVU0217 0.71 -0.0 257,905 + DVU0217 0.71 -3.2 257,905 + DVU0217 0.71 -0.5 257,906 - DVU0217 0.71 -0.7 257,913 - DVU0217 0.73 +0.9
Or see this region's nucleotide sequence