Experiment: MoLS4 with L-Cysteine 5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0933 and DVU0934 overlap by 20 nucleotides DVU0934 and DVU0935 overlap by 4 nucleotides
DVU0933: DVU0933 - response regulator (TIGR), at 1,023,539 to 1,024,783
DVU0933
DVU0934: DVU0934 - hypothetical protein (TIGR), at 1,024,764 to 1,025,024
DVU0934
DVU0935: DVU0935 - methyl-accepting chemotaxis protein (TIGR), at 1,025,021 to 1,027,525
DVU0935
Position (kb)
1024
1025
1026 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1023.780 kb on + strand, within DVU0933 at 1023.798 kb on - strand, within DVU0933 at 1023.806 kb on + strand, within DVU0933 at 1023.811 kb on + strand, within DVU0933 at 1023.814 kb on - strand, within DVU0933 at 1023.936 kb on - strand, within DVU0933 at 1024.038 kb on + strand, within DVU0933 at 1024.106 kb on + strand, within DVU0933 at 1024.228 kb on + strand, within DVU0933 at 1024.228 kb on + strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.236 kb on - strand, within DVU0933 at 1024.351 kb on + strand, within DVU0933 at 1024.377 kb on + strand, within DVU0933 at 1024.390 kb on + strand, within DVU0933 at 1024.398 kb on - strand, within DVU0933 at 1024.452 kb on + strand, within DVU0933 at 1024.465 kb on + strand, within DVU0933 at 1024.539 kb on - strand, within DVU0933 at 1024.539 kb on - strand, within DVU0933 at 1024.680 kb on + strand at 1024.716 kb on - strand at 1024.821 kb on - strand, within DVU0934 at 1024.964 kb on + strand, within DVU0934 at 1024.964 kb on + strand, within DVU0934 at 1024.972 kb on - strand, within DVU0934 at 1025.097 kb on - strand at 1025.102 kb on - strand at 1025.157 kb on + strand at 1025.187 kb on + strand at 1025.326 kb on + strand, within DVU0935 at 1025.334 kb on - strand, within DVU0935 at 1025.404 kb on - strand, within DVU0935 at 1025.418 kb on - strand, within DVU0935 at 1025.485 kb on + strand, within DVU0935 at 1025.532 kb on + strand, within DVU0935 at 1025.540 kb on - strand, within DVU0935 at 1025.565 kb on + strand, within DVU0935 at 1025.583 kb on - strand, within DVU0935 at 1025.745 kb on + strand, within DVU0935 at 1025.814 kb on + strand, within DVU0935 at 1025.822 kb on - strand, within DVU0935
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Cysteine 5mM as nutrient remove 1,023,780 + DVU0933 0.19 -0.1 1,023,798 - DVU0933 0.21 +0.9 1,023,806 + DVU0933 0.21 -0.3 1,023,811 + DVU0933 0.22 -1.0 1,023,814 - DVU0933 0.22 +0.7 1,023,936 - DVU0933 0.32 -0.4 1,024,038 + DVU0933 0.40 -2.0 1,024,106 + DVU0933 0.46 -0.0 1,024,228 + DVU0933 0.55 +0.4 1,024,228 + DVU0933 0.55 -0.7 1,024,236 - DVU0933 0.56 -0.4 1,024,236 - DVU0933 0.56 +0.1 1,024,236 - DVU0933 0.56 -0.0 1,024,236 - DVU0933 0.56 -0.6 1,024,351 + DVU0933 0.65 -1.2 1,024,377 + DVU0933 0.67 -0.6 1,024,390 + DVU0933 0.68 +0.3 1,024,398 - DVU0933 0.69 -0.6 1,024,452 + DVU0933 0.73 -0.6 1,024,465 + DVU0933 0.74 -0.5 1,024,539 - DVU0933 0.80 -0.7 1,024,539 - DVU0933 0.80 -0.1 1,024,680 + -0.7 1,024,716 - -0.3 1,024,821 - DVU0934 0.22 +0.2 1,024,964 + DVU0934 0.77 +0.3 1,024,964 + DVU0934 0.77 +0.2 1,024,972 - DVU0934 0.80 +0.1 1,025,097 - -0.4 1,025,102 - +0.0 1,025,157 + -0.0 1,025,187 + +0.4 1,025,326 + DVU0935 0.12 +0.0 1,025,334 - DVU0935 0.12 +0.3 1,025,404 - DVU0935 0.15 +0.2 1,025,418 - DVU0935 0.16 -0.4 1,025,485 + DVU0935 0.19 -3.6 1,025,532 + DVU0935 0.20 -1.1 1,025,540 - DVU0935 0.21 -0.3 1,025,565 + DVU0935 0.22 -1.9 1,025,583 - DVU0935 0.22 -0.2 1,025,745 + DVU0935 0.29 -0.1 1,025,814 + DVU0935 0.32 -0.6 1,025,822 - DVU0935 0.32 +0.7
Or see this region's nucleotide sequence