Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS19570

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
4,426,989	+		PFLU_RS19565	0.52	+2.6
4,426,989	+		PFLU_RS19565	0.52	+0.1
4,426,989	+		PFLU_RS19565	0.52	-0.9
4,426,989	+		PFLU_RS19565	0.52	-0.2
4,426,990	-		PFLU_RS19565	0.52	-0.7
4,426,990	-		PFLU_RS19565	0.52	-1.9
4,426,998	+		PFLU_RS19565	0.52	-1.4
4,426,998	+		PFLU_RS19565	0.52	-1.6
4,426,998	+		PFLU_RS19565	0.52	-0.7
4,426,998	+		PFLU_RS19565	0.52	-0.1
4,426,999	-		PFLU_RS19565	0.53	-0.1
4,426,999	-		PFLU_RS19565	0.53	-0.6
4,426,999	-		PFLU_RS19565	0.53	-1.9
4,427,010	+		PFLU_RS19565	0.53	-1.3
4,427,011	-		PFLU_RS19565	0.53	-0.4
4,427,089	+		PFLU_RS19565	0.58	-1.9
4,427,089	+		PFLU_RS19565	0.58	-0.6
4,427,089	+		PFLU_RS19565	0.58	+0.9
4,427,089	+		PFLU_RS19565	0.58	+4.3
4,427,089	+		PFLU_RS19565	0.58	-1.2
4,427,089	+		PFLU_RS19565	0.58	+0.6
4,427,089	+		PFLU_RS19565	0.58	+1.0
4,427,089	+		PFLU_RS19565	0.58	+1.1
4,427,089	+		PFLU_RS19565	0.58	+0.6
4,427,089	+		PFLU_RS19565	0.58	+1.9
4,427,089	+		PFLU_RS19565	0.58	-2.5
4,427,089	+		PFLU_RS19565	0.58	+1.1
4,427,089	+		PFLU_RS19565	0.58	-0.2
4,427,090	-		PFLU_RS19565	0.59	+0.7
4,427,090	-		PFLU_RS19565	0.59	-1.2
4,427,090	-		PFLU_RS19565	0.59	+1.1
4,427,090	-		PFLU_RS19565	0.59	-1.9
4,427,157	+		PFLU_RS19565	0.63	+0.1
4,427,158	-		PFLU_RS19565	0.63	-0.0
4,427,158	-		PFLU_RS19565	0.63	+1.3
4,427,158	-		PFLU_RS19565	0.63	+1.4
4,427,158	-		PFLU_RS19565	0.63	+0.8
4,427,160	+		PFLU_RS19565	0.63	+1.2
4,427,160	+		PFLU_RS19565	0.63	-0.7
4,427,160	+		PFLU_RS19565	0.63	+1.5
4,427,160	+		PFLU_RS19565	0.63	+1.1
4,427,160	+		PFLU_RS19565	0.63	-2.1
4,427,160	+		PFLU_RS19565	0.63	-1.6
4,427,160	+		PFLU_RS19565	0.63	+0.9
4,427,160	+		PFLU_RS19565	0.63	-0.9
4,427,160	+		PFLU_RS19565	0.63	+1.6
4,427,160	+		PFLU_RS19565	0.63	+0.8
4,427,160	+		PFLU_RS19565	0.63	-1.2
4,427,160	+		PFLU_RS19565	0.63	-1.3
4,427,161	-		PFLU_RS19565	0.63	-1.9
4,427,161	-		PFLU_RS19565	0.63	-0.2
4,427,161	-		PFLU_RS19565	0.63	+1.3
4,427,161	-		PFLU_RS19565	0.63	-0.4
4,427,161	-		PFLU_RS19565	0.63	+0.5
4,427,287	+		PFLU_RS19565	0.71	+1.3
4,427,287	+		PFLU_RS19565	0.71	+1.1
4,427,288	-		PFLU_RS19565	0.72	-0.2
4,427,288	-		PFLU_RS19565	0.72	+1.1
4,427,288	-		PFLU_RS19565	0.72	+0.7
4,427,437	-		PFLU_RS19565	0.81	+0.9
4,427,463	+		PFLU_RS19565	0.83	+2.1
4,427,463	+		PFLU_RS19565	0.83	-0.7
4,427,463	+		PFLU_RS19565	0.83	-0.2
4,427,463	+		PFLU_RS19565	0.83	+0.3
4,427,463	+		PFLU_RS19565	0.83	-0.1
4,427,464	-		PFLU_RS19565	0.83	-0.7
4,427,464	-		PFLU_RS19565	0.83	+0.1
4,427,464	-		PFLU_RS19565	0.83	-0.8
4,427,464	-		PFLU_RS19565	0.83	-0.4
4,427,464	-		PFLU_RS19565	0.83	+2.1
4,427,464	-		PFLU_RS19565	0.83	-0.4
4,427,466	+		PFLU_RS19565	0.83	-2.2
4,427,466	+		PFLU_RS19565	0.83	-0.7
4,427,466	+		PFLU_RS19565	0.83	+1.0
4,427,466	+		PFLU_RS19565	0.83	+0.2
4,427,466	+		PFLU_RS19565	0.83	+0.1
4,427,466	+		PFLU_RS19565	0.83	-1.9
4,427,466	+		PFLU_RS19565	0.83	-1.9
4,427,466	+		PFLU_RS19565	0.83	-0.3
4,427,466	+		PFLU_RS19565	0.83	+1.1
4,427,466	+		PFLU_RS19565	0.83	-1.9
4,427,466	+		PFLU_RS19565	0.83	+2.1
4,427,467	-		PFLU_RS19565	0.83	+0.4
4,427,467	-		PFLU_RS19565	0.83	-2.4
4,427,467	-		PFLU_RS19565	0.83	-1.7
4,427,467	-		PFLU_RS19565	0.83	+0.4
4,427,467	-		PFLU_RS19565	0.83	+0.1
4,427,467	-		PFLU_RS19565	0.83	+0.6
4,427,467	-		PFLU_RS19565	0.83	+0.4
4,427,467	-		PFLU_RS19565	0.83	+0.8
4,427,467	-		PFLU_RS19565	0.83	+1.5
4,427,467	-		PFLU_RS19565	0.83	+1.1
4,427,467	-		PFLU_RS19565	0.83	+0.1
4,427,467	-		PFLU_RS19565	0.83	-1.4
4,427,467	-		PFLU_RS19565	0.83	-1.2
4,427,467	-		PFLU_RS19565	0.83	-0.2
4,427,467	-		PFLU_RS19565	0.83	-0.9
4,427,467	-		PFLU_RS19565	0.83	-1.6
4,427,467	-		PFLU_RS19565	0.83	-1.1
4,427,467	-		PFLU_RS19565	0.83	-0.4
4,427,467	-		PFLU_RS19565	0.83	-1.2
4,427,467	-		PFLU_RS19565	0.83	+0.1
4,427,467	-		PFLU_RS19565	0.83	+0.5
4,427,467	-		PFLU_RS19565	0.83	+0.6
4,427,467	-		PFLU_RS19565	0.83	-1.7
4,427,570	+				-1.6
4,427,570	+				-0.4
4,427,570	+				+0.0
4,427,570	+				-0.4
4,427,570	+				-1.5
4,427,570	+				-0.9
4,427,570	+				-0.2
4,427,571	-				+0.6
4,427,639	+				+0.0
4,427,703	-				-0.8
4,427,703	-				+2.0
4,427,923	+				+0.8
4,427,924	-				+0.1
4,427,924	-				-0.7
4,427,924	-				+0.1
4,428,034	+		PFLU_RS19570	0.10	+0.6
4,428,034	+		PFLU_RS19570	0.10	-1.9
4,428,034	+		PFLU_RS19570	0.10	-1.6
4,428,034	+		PFLU_RS19570	0.10	-1.9
4,428,035	-		PFLU_RS19570	0.10	-2.4
4,428,035	-		PFLU_RS19570	0.10	+0.6
4,428,035	-		PFLU_RS19570	0.10	-1.4
4,428,035	-		PFLU_RS19570	0.10	-0.1
4,428,035	-		PFLU_RS19570	0.10	+1.7
4,428,035	-		PFLU_RS19570	0.10	+1.1
4,428,035	-		PFLU_RS19570	0.10	-1.9
4,428,035	-		PFLU_RS19570	0.10	-1.4
4,428,035	-		PFLU_RS19570	0.10	+1.7
4,428,035	-		PFLU_RS19570	0.10	-2.4
4,428,035	-		PFLU_RS19570	0.10	-1.0
4,428,035	-		PFLU_RS19570	0.10	-0.9
4,428,035	-		PFLU_RS19570	0.10	+0.6
4,428,035	-		PFLU_RS19570	0.10	-1.0
4,428,035	-		PFLU_RS19570	0.10	-2.4
4,428,035	-		PFLU_RS19570	0.10	+1.3
4,428,035	-		PFLU_RS19570	0.10	-0.5
4,428,035	-		PFLU_RS19570	0.10	+0.9
4,428,169	-		PFLU_RS19570	0.30	-1.7
4,428,547	+		PFLU_RS19570	0.85	+3.1
4,428,547	+		PFLU_RS19570	0.85	-2.0
4,428,548	-		PFLU_RS19570	0.85	+2.1
4,428,548	-		PFLU_RS19570	0.85	-1.6
4,428,551	+		PFLU_RS19570	0.86	-1.9
4,428,551	+		PFLU_RS19570	0.86	+0.2
4,428,551	+		PFLU_RS19570	0.86	-0.8
4,428,552	-		PFLU_RS19570	0.86	+0.1
4,428,589	+				-1.3
4,428,589	+				-0.2
4,428,589	+				+0.5
4,428,589	+				+2.3
4,428,589	+				-1.9
4,428,589	+				-1.8
4,428,589	+				+0.5
4,428,589	+				-0.2
4,428,589	+				-1.0
4,428,589	+				-1.6
4,428,589	+				-0.8
4,428,589	+				-1.2
4,428,589	+				-1.4
4,428,589	+				-2.2
4,428,589	+				+1.1
4,428,589	+				-1.2
4,428,589	+				-1.6
4,428,590	-				-1.3
4,428,590	-				-1.8
4,428,590	-				+2.4
4,428,590	-				-1.0
4,428,590	-				+0.9
4,428,590	-				-0.1
4,428,590	-				+0.5
4,428,590	-				-1.8
4,428,590	-				-1.6
4,428,590	-				+0.1
4,428,590	-				+1.2
4,428,590	-				-0.1
4,428,590	-				-1.2
4,428,590	-				+0.6
4,428,590	-				-3.4
4,428,590	-				-0.9
4,428,590	-				+1.0
4,428,590	-				-2.6
4,428,590	-				-0.7
4,428,590	-				+1.6
4,428,590	-				-1.7
4,428,590	-				+0.1
4,428,590	-				-2.4
4,428,590	-				+1.3
4,428,651	+				+0.9
4,428,679	+				+0.1
4,428,679	+				-3.3
4,428,680	-				-0.1
4,428,680	-				-0.9
4,428,680	-				-3.1
4,428,722	+				-0.4
4,428,723	-				-1.2
4,428,723	-				+1.4
4,428,743	+				-0.7
4,428,743	+				-1.2
4,428,744	-				-2.1
4,428,762	+				-1.0
4,428,762	+				+1.5
4,428,763	-				-0.9
4,428,763	-				+0.2
4,428,794	+				-1.6
4,428,794	+				-1.8
4,428,794	+				+0.7
4,428,794	+				-0.7
4,428,794	+				-0.0
4,428,795	-				+1.8
4,428,795	-				-0.4
4,428,797	-				-1.3
4,428,797	-				+0.7
4,428,797	-				-1.4
4,428,797	-				+1.9
4,428,797	-				-1.7
4,428,920	+				+0.2
4,428,920	+				+0.1
4,428,921	-				-1.6
4,428,934	+				-2.0
4,428,934	+				+1.1
4,428,935	-				-1.7
4,429,149	+				-0.2
4,429,150	-				+1.1
4,429,150	-				+0.4
4,429,150	-				-1.0
4,429,150	-				-0.4
4,429,263	+				-0.7
4,429,263	+				-1.8
4,429,263	+				-0.9
4,429,263	+				-0.9
4,429,264	-				+1.0
4,429,264	-				-0.8
4,429,264	-				-1.3
4,429,264	-				+1.0
4,429,264	-				+0.6
4,429,335	+				-0.7
4,429,336	-				-0.0
4,429,336	-				-0.7
4,429,495	-		PFLU_RS19575	0.10	+1.5
4,429,495	-		PFLU_RS19575	0.10	+0.0
4,429,518	+		PFLU_RS19575	0.11	+0.9
4,429,587	+		PFLU_RS19575	0.12	+1.0