Experiment: MOLS with alpha-ketoglutaric 2.5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0655 and DVU0656 are separated by 138 nucleotides DVU0656 and DVU0657 are separated by 66 nucleotides DVU0657 and DVU0658 are separated by 10 nucleotides DVU0658 and DVU0659 are separated by 258 nucleotides
DVU0655: DVU0655 - PHP domain protein (TIGR), at 727,882 to 728,748
DVU0655
DVU0656: DVU0656 - conserved hypothetical protein (TIGR), at 728,887 to 729,096
DVU0656
DVU0657: DVU0657 - heat shock protein, Hsp20 family (TIGR), at 729,163 to 729,576
DVU0657
DVU0658: DVU0658 - heat shock protein, Hsp20 family (TIGR), at 729,587 to 730,048
DVU0658
DVU0659: DVU0659 - hypothetical protein (TIGR), at 730,307 to 731,077
DVU0659
Position (kb) 729
730 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 728.166 kb on - strand, within DVU0655 at 728.166 kb on - strand, within DVU0655 at 728.173 kb on - strand, within DVU0655 at 728.187 kb on + strand, within DVU0655 at 728.334 kb on - strand, within DVU0655 at 728.379 kb on + strand, within DVU0655 at 728.387 kb on - strand, within DVU0655 at 728.390 kb on - strand, within DVU0655 at 728.510 kb on - strand, within DVU0655 at 728.773 kb on + strand at 728.845 kb on + strand at 729.125 kb on + strand at 729.174 kb on + strand at 729.182 kb on - strand at 729.301 kb on + strand, within DVU0657 at 729.309 kb on - strand, within DVU0657 at 729.605 kb on - strand at 729.616 kb on + strand at 729.616 kb on + strand at 729.905 kb on + strand, within DVU0658 at 729.905 kb on + strand, within DVU0658 at 729.920 kb on + strand, within DVU0658 at 729.945 kb on + strand, within DVU0658 at 730.064 kb on - strand at 730.096 kb on - strand at 730.096 kb on - strand at 730.143 kb on - strand at 730.143 kb on - strand at 730.171 kb on + strand at 730.277 kb on - strand at 730.310 kb on + strand at 730.349 kb on - strand at 730.455 kb on - strand, within DVU0659 at 730.488 kb on + strand, within DVU0659 at 730.549 kb on + strand, within DVU0659 at 730.549 kb on + strand, within DVU0659 at 730.575 kb on + strand, within DVU0659
Per-strain Table
Position Strand Gene LocusTag Fraction MOLS with alpha-ketoglutaric 2.5mM as nutrient remove 728,166 - DVU0655 0.33 -0.1 728,166 - DVU0655 0.33 +0.3 728,173 - DVU0655 0.34 +0.2 728,187 + DVU0655 0.35 -1.8 728,334 - DVU0655 0.52 -1.6 728,379 + DVU0655 0.57 +0.0 728,387 - DVU0655 0.58 +0.2 728,390 - DVU0655 0.59 +0.9 728,510 - DVU0655 0.72 -0.7 728,773 + +0.9 728,845 + +0.1 729,125 + +0.0 729,174 + -2.4 729,182 - -0.2 729,301 + DVU0657 0.33 -2.1 729,309 - DVU0657 0.35 -0.2 729,605 - -0.3 729,616 + +0.1 729,616 + -1.2 729,905 + DVU0658 0.69 -0.5 729,905 + DVU0658 0.69 +1.2 729,920 + DVU0658 0.72 +0.1 729,945 + DVU0658 0.77 -0.1 730,064 - -0.4 730,096 - +0.2 730,096 - +1.5 730,143 - -0.1 730,143 - +0.7 730,171 + +3.5 730,277 - -1.6 730,310 + -1.2 730,349 - -0.8 730,455 - DVU0659 0.19 -0.6 730,488 + DVU0659 0.23 -0.4 730,549 + DVU0659 0.31 -0.8 730,549 + DVU0659 0.31 +0.2 730,575 + DVU0659 0.35 -1.3
Or see this region's nucleotide sequence