Experiment: MoLS4 with Oxaloacetate 2.5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0752 and DVU0753 are separated by 97 nucleotides DVU0753 and DVU0754 overlap by 4 nucleotides DVU0754 and DVU0755 are separated by 111 nucleotides
DVU0752: DVU0752 - amino acid ABC transporter, amino acid-binding protein (TIGR), at 844,606 to 845,433
DVU0752
DVU0753: DVU0753 - amino acid ABC transporter, ATP-binding protein (TIGR), at 845,531 to 846,262
DVU0753
DVU0754: DVU0754 - hypothetical protein (TIGR), at 846,259 to 846,393
DVU0754
DVU0755: DVU0755 - sensor histidine kinase, putative (TIGR), at 846,505 to 847,872
DVU0755
Position (kb) 846
847 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 845.350 kb on + strand, within DVU0752 at 845.358 kb on - strand at 845.397 kb on - strand at 845.411 kb on - strand at 845.421 kb on + strand at 845.455 kb on + strand at 845.542 kb on + strand at 845.609 kb on - strand, within DVU0753 at 845.619 kb on + strand, within DVU0753 at 845.632 kb on - strand, within DVU0753 at 845.698 kb on - strand, within DVU0753 at 845.768 kb on + strand, within DVU0753 at 845.805 kb on - strand, within DVU0753 at 845.805 kb on - strand, within DVU0753 at 845.852 kb on - strand, within DVU0753 at 845.902 kb on + strand, within DVU0753 at 845.942 kb on - strand, within DVU0753 at 845.949 kb on + strand, within DVU0753 at 845.969 kb on - strand, within DVU0753 at 845.980 kb on - strand, within DVU0753 at 845.992 kb on + strand, within DVU0753 at 845.998 kb on + strand, within DVU0753 at 846.006 kb on - strand, within DVU0753 at 846.030 kb on + strand, within DVU0753 at 846.030 kb on + strand, within DVU0753 at 846.033 kb on - strand, within DVU0753 at 846.038 kb on - strand, within DVU0753 at 846.060 kb on + strand, within DVU0753 at 846.177 kb on - strand, within DVU0753 at 846.187 kb on - strand, within DVU0753 at 846.276 kb on - strand, within DVU0754 at 846.488 kb on + strand at 846.511 kb on - strand at 846.627 kb on - strand at 846.632 kb on - strand at 846.780 kb on - strand, within DVU0755 at 846.782 kb on - strand, within DVU0755 at 846.860 kb on + strand, within DVU0755 at 846.935 kb on - strand, within DVU0755 at 847.211 kb on + strand, within DVU0755 at 847.359 kb on + strand, within DVU0755
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Oxaloacetate 2.5mM as nutrient remove 845,350 + DVU0752 0.90 +0.4 845,358 - +0.3 845,397 - -0.7 845,411 - +1.1 845,421 + -0.3 845,455 + -0.4 845,542 + -0.1 845,609 - DVU0753 0.11 -0.2 845,619 + DVU0753 0.12 +0.1 845,632 - DVU0753 0.14 +0.0 845,698 - DVU0753 0.23 -0.2 845,768 + DVU0753 0.32 -2.1 845,805 - DVU0753 0.37 -0.1 845,805 - DVU0753 0.37 -0.3 845,852 - DVU0753 0.44 -0.0 845,902 + DVU0753 0.51 -0.8 845,942 - DVU0753 0.56 -0.8 845,949 + DVU0753 0.57 -0.3 845,969 - DVU0753 0.60 +0.1 845,980 - DVU0753 0.61 +0.6 845,992 + DVU0753 0.63 -0.5 845,998 + DVU0753 0.64 +1.0 846,006 - DVU0753 0.65 -2.3 846,030 + DVU0753 0.68 +1.8 846,030 + DVU0753 0.68 +0.3 846,033 - DVU0753 0.69 -0.9 846,038 - DVU0753 0.69 -1.9 846,060 + DVU0753 0.72 -0.2 846,177 - DVU0753 0.88 +0.1 846,187 - DVU0753 0.90 +2.8 846,276 - DVU0754 0.13 +0.2 846,488 + -0.2 846,511 - +2.5 846,627 - +1.5 846,632 - -0.3 846,780 - DVU0755 0.20 +0.8 846,782 - DVU0755 0.20 +0.1 846,860 + DVU0755 0.26 +0.0 846,935 - DVU0755 0.31 -2.2 847,211 + DVU0755 0.52 +1.3 847,359 + DVU0755 0.62 -3.9
Or see this region's nucleotide sequence