Experiment: MoLS4 with Oxaloacetate 2.5mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0635 and DVU0636 are separated by 516 nucleotides DVU0636 and DVU0637 are separated by 279 nucleotides
DVU0635: DVU0635 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (TIGR), at 702,696 to 704,282
DVU0635
DVU0636: DVU0636 - response regulator/GGDEF domain protein (TIGR), at 704,799 to 706,112
DVU0636
DVU0637: DVU0637 - conserved hypothetical protein (TIGR), at 706,392 to 707,780
DVU0637
Position (kb) 704
705
706
707 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 704.328 kb on + strand at 704.341 kb on - strand at 704.355 kb on + strand at 704.472 kb on - strand at 704.490 kb on + strand at 704.500 kb on + strand at 704.500 kb on + strand at 704.500 kb on + strand at 704.500 kb on + strand at 704.500 kb on + strand at 704.508 kb on - strand at 704.508 kb on - strand at 704.508 kb on - strand at 704.508 kb on - strand at 704.517 kb on + strand at 704.535 kb on + strand at 704.543 kb on - strand at 704.587 kb on + strand at 704.597 kb on + strand at 704.597 kb on + strand at 704.597 kb on + strand at 704.597 kb on + strand at 704.597 kb on + strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.605 kb on - strand at 704.619 kb on + strand at 704.657 kb on + strand at 704.663 kb on + strand at 704.702 kb on - strand at 704.745 kb on + strand at 704.806 kb on + strand at 704.864 kb on + strand at 705.065 kb on - strand, within DVU0636 at 705.077 kb on + strand, within DVU0636 at 705.085 kb on - strand, within DVU0636 at 705.107 kb on + strand, within DVU0636 at 705.123 kb on + strand, within DVU0636 at 705.225 kb on - strand, within DVU0636 at 705.268 kb on + strand, within DVU0636 at 705.310 kb on + strand, within DVU0636 at 705.361 kb on - strand, within DVU0636 at 705.400 kb on - strand, within DVU0636 at 705.419 kb on + strand, within DVU0636 at 705.508 kb on - strand, within DVU0636 at 705.516 kb on + strand, within DVU0636 at 705.540 kb on - strand, within DVU0636 at 705.547 kb on + strand, within DVU0636 at 705.592 kb on - strand, within DVU0636 at 705.645 kb on + strand, within DVU0636 at 705.711 kb on - strand, within DVU0636 at 705.740 kb on + strand, within DVU0636 at 705.750 kb on + strand, within DVU0636 at 705.837 kb on - strand, within DVU0636 at 705.842 kb on - strand, within DVU0636 at 705.853 kb on + strand, within DVU0636 at 705.861 kb on - strand, within DVU0636 at 705.861 kb on - strand, within DVU0636 at 705.874 kb on + strand, within DVU0636 at 705.883 kb on + strand, within DVU0636 at 705.891 kb on - strand, within DVU0636 at 705.891 kb on - strand, within DVU0636 at 705.971 kb on - strand, within DVU0636 at 705.998 kb on + strand at 706.042 kb on + strand at 706.055 kb on + strand at 706.057 kb on + strand at 706.063 kb on - strand at 706.071 kb on + strand at 706.124 kb on - strand at 706.202 kb on + strand at 706.208 kb on - strand at 706.208 kb on - strand at 706.313 kb on - strand at 706.323 kb on - strand at 706.336 kb on + strand at 706.351 kb on + strand at 706.359 kb on - strand at 706.389 kb on + strand at 706.430 kb on - strand at 706.432 kb on + strand at 706.458 kb on - strand at 706.476 kb on + strand at 706.490 kb on - strand at 706.567 kb on + strand, within DVU0637 at 706.567 kb on + strand, within DVU0637 at 706.567 kb on + strand, within DVU0637 at 706.567 kb on + strand, within DVU0637 at 706.575 kb on - strand, within DVU0637 at 706.575 kb on - strand, within DVU0637 at 706.575 kb on - strand, within DVU0637 at 706.575 kb on - strand, within DVU0637 at 706.591 kb on + strand, within DVU0637 at 706.769 kb on - strand, within DVU0637 at 706.853 kb on + strand, within DVU0637 at 706.906 kb on + strand, within DVU0637 at 706.906 kb on + strand, within DVU0637 at 706.927 kb on - strand, within DVU0637 at 706.935 kb on - strand, within DVU0637 at 706.961 kb on + strand, within DVU0637 at 706.967 kb on + strand, within DVU0637
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Oxaloacetate 2.5mM as nutrient remove 704,328 + +0.3 704,341 - -0.1 704,355 + -0.4 704,472 - -0.4 704,490 + -0.3 704,500 + -2.7 704,500 + +0.7 704,500 + +2.0 704,500 + -0.1 704,500 + +0.7 704,508 - +0.0 704,508 - -0.4 704,508 - -0.2 704,508 - -0.5 704,517 + +0.8 704,535 + -2.1 704,543 - +0.1 704,587 + -2.0 704,597 + +0.6 704,597 + -0.9 704,597 + -0.2 704,597 + +0.1 704,597 + -2.0 704,605 - +1.2 704,605 - -0.2 704,605 - +0.1 704,605 - +0.8 704,605 - -1.8 704,605 - -0.6 704,605 - -0.0 704,605 - -0.4 704,605 - +1.3 704,605 - +0.3 704,605 - -2.5 704,619 + -0.1 704,657 + +0.5 704,663 + -0.5 704,702 - -0.1 704,745 + +0.8 704,806 + -0.1 704,864 + +1.1 705,065 - DVU0636 0.20 -0.1 705,077 + DVU0636 0.21 -2.1 705,085 - DVU0636 0.22 -0.4 705,107 + DVU0636 0.23 +2.1 705,123 + DVU0636 0.25 -3.0 705,225 - DVU0636 0.32 -0.1 705,268 + DVU0636 0.36 -0.3 705,310 + DVU0636 0.39 -0.0 705,361 - DVU0636 0.43 +0.6 705,400 - DVU0636 0.46 +0.8 705,419 + DVU0636 0.47 -1.1 705,508 - DVU0636 0.54 -0.0 705,516 + DVU0636 0.55 -0.4 705,540 - DVU0636 0.56 -0.1 705,547 + DVU0636 0.57 -0.4 705,592 - DVU0636 0.60 +2.4 705,645 + DVU0636 0.64 +0.2 705,711 - DVU0636 0.69 -0.5 705,740 + DVU0636 0.72 -0.6 705,750 + DVU0636 0.72 +1.3 705,837 - DVU0636 0.79 -0.3 705,842 - DVU0636 0.79 -2.0 705,853 + DVU0636 0.80 -0.1 705,861 - DVU0636 0.81 -2.4 705,861 - DVU0636 0.81 +1.2 705,874 + DVU0636 0.82 -0.7 705,883 + DVU0636 0.82 +0.3 705,891 - DVU0636 0.83 -1.6 705,891 - DVU0636 0.83 +1.1 705,971 - DVU0636 0.89 -0.0 705,998 + -0.2 706,042 + -0.4 706,055 + -0.3 706,057 + +0.0 706,063 - -0.2 706,071 + -1.0 706,124 - +0.6 706,202 + +1.4 706,208 - -2.6 706,208 - +0.1 706,313 - -1.0 706,323 - +0.0 706,336 + -0.0 706,351 + -0.5 706,359 - -1.0 706,389 + -2.8 706,430 - -0.7 706,432 + -0.7 706,458 - -0.3 706,476 + +0.4 706,490 - +0.4 706,567 + DVU0637 0.13 -1.3 706,567 + DVU0637 0.13 +1.7 706,567 + DVU0637 0.13 -2.2 706,567 + DVU0637 0.13 +0.6 706,575 - DVU0637 0.13 -0.3 706,575 - DVU0637 0.13 -0.3 706,575 - DVU0637 0.13 -1.7 706,575 - DVU0637 0.13 +0.0 706,591 + DVU0637 0.14 -0.2 706,769 - DVU0637 0.27 -0.6 706,853 + DVU0637 0.33 -0.2 706,906 + DVU0637 0.37 -0.4 706,906 + DVU0637 0.37 -2.2 706,927 - DVU0637 0.39 -0.4 706,935 - DVU0637 0.39 -1.5 706,961 + DVU0637 0.41 +0.1 706,967 + DVU0637 0.41 -2.1
Or see this region's nucleotide sequence